| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_0883 |
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| Symbol | lysS |
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| ID | 8390191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 8802 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013161 |
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| Strand | - |
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| Start bp | 894574 |
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| End bp | 896295 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644978900 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_003136654 |
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| Protein GI | 257058766 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00462] lysyl-tRNA synthetase-like protein GenX
[TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.158887 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCCGA ATCAACCCCC AAAAGAGCCT CATTCTGCTT CAAGTTTAGA AGAAATTCGC
GCTACACGCT TAGAAAAAGT TGAACAGTTG CAACAATTGG GATTAGTTCC CTACGCCTAT
AAATGGGAAT CTACCCATAC GGCAGCCAAT TTACAAGATA AATATGCCAC TCTTAAAGAT
GGGGAAGAAG TTGATCTAGA AGTAGCGATC GCAGGAAGAA TTATTGCCCG TCGTGTCTTC
GGAAAATTGG CCTTTTTTAG TCTCCAAGAT GAAACCGCAA CCATTCAATT ATATTTAGAT
AAACAACAAA TTGATACCTC AATGACTGAG GTGACTGATG CCTTTAATAC CCTGAAAAAA
TTAACCGATA CAGGGGATAT TTTAGGCGTT GTAGGAACCA TTAAACGAAC GGAAAAGGGA
GAACTTTCGG TGAAGGTTCA AACCTATACG ATTTTGACGA AATCTTTACT CCCTTTACCC
GATAAATGGC ATGGGTTAAC GGATACAGAA AAACGCTATC GTCAACGCTA CGTCGATTTA
ATTGTTAATC CCCAAGTTCG TCAAACTTTT CGCCGTCGGG CTCAAATTAC CGCTTCTATT
CGTCGTTATT TAGATGAGAA CGGCTTTATC GAAATAGAAA CTCCTGTTTT ACAAAGTGAA
GCGGGAGGAG CAGAAGCGCG TCCGTTTATT ACCTATCATA ACACCTTGGA TATGGAATTA
TATCTGAGGA TTGCTACCGA ATTGCATCTA AAACGCTTAA TTATTGGCGG CTTTGAAAAG
GTGTTTGAAT TGGGGCGAAT TTTCCGTAAT GAAGGAGTTT CTACTAAACA TAATCCTGAG
TTTACTTCCA TCGAAGTTTA TCAAGCCTAC GCCGATTATT TTGATATGAT GGAGTTAACT
GAAGCACTTA TTACCAATGC CGCTCAAGCC GTTTTAGGCA CATTAAAACT TACCTATCAA
GAGATAGAAA TTGATTTATC AACCCCTTGG CGACGGGTGA CAATGACAGA CATTGTTAAA
GAAAAAACGG GGTTAGATTT TGATAGCTTT ACTGACTTTG AAAGTGCAAA AGAAGCAGCA
AAAAAAGCAG GAATAGACGT TCCTAATGAC TGTCCTTCTC TCGGAAAATT AATGAATGAA
GCCTTTGAAC AAAAGGTAGA AGAAACCTTA ATTCAACCGA CTTTTATTCT AGATTTTCCC
GTAGAAATTT CACCCTTAGC AAAACCCCAT CGCTCTAAAA AAGGGTTAGT AGAACGTTTT
GAATTATACA TTGTTGGCCG AGAATTAGCC AATAGTTTTT CGGAATTAAC CGATCCCATC
GATCAACGGG AAAGATTAGA AAAACAAGCC GAACAAAAGG CCTCTGGAGA CTTAGAGGCA
CAAGGAGTTG ATGAAGATTT TCTAACCGCT TTGGAATACG GAATGCCTCC GACTGGAGGG
TTAGGCATTG GCATCGATCG CTTAGTTATG TTATTAACTG ATTCTCCGAG TATTCGGGAT
GTAATTGCCT TTCCTCTCTT AAAAAGTCAG AGTGTTACTG TTAAGTCGTT TGACTATGAT
GCTGACAAAA AAATTCTTAG GGTTGAATTT ACTAATGGCA GTATTTATCA ATACCATGAT
GTGCCTAAAT CTCTCTATCA AGCGTTAGAA AAAGCCCCCT CAAAAGGACA GTTTTTTAAT
GCAGAAATTC GGGATAAATT TGGCTTTGAT CGAGAAGTTT AA
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| Protein sequence | MSPNQPPKEP HSASSLEEIR ATRLEKVEQL QQLGLVPYAY KWESTHTAAN LQDKYATLKD
GEEVDLEVAI AGRIIARRVF GKLAFFSLQD ETATIQLYLD KQQIDTSMTE VTDAFNTLKK
LTDTGDILGV VGTIKRTEKG ELSVKVQTYT ILTKSLLPLP DKWHGLTDTE KRYRQRYVDL
IVNPQVRQTF RRRAQITASI RRYLDENGFI EIETPVLQSE AGGAEARPFI TYHNTLDMEL
YLRIATELHL KRLIIGGFEK VFELGRIFRN EGVSTKHNPE FTSIEVYQAY ADYFDMMELT
EALITNAAQA VLGTLKLTYQ EIEIDLSTPW RRVTMTDIVK EKTGLDFDSF TDFESAKEAA
KKAGIDVPND CPSLGKLMNE AFEQKVEETL IQPTFILDFP VEISPLAKPH RSKKGLVERF
ELYIVGRELA NSFSELTDPI DQRERLEKQA EQKASGDLEA QGVDEDFLTA LEYGMPPTGG
LGIGIDRLVM LLTDSPSIRD VIAFPLLKSQ SVTVKSFDYD ADKKILRVEF TNGSIYQYHD
VPKSLYQALE KAPSKGQFFN AEIRDKFGFD REV
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