| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_0599 |
|---|
| Symbol | |
|---|
| ID | 8389905 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | + |
|---|
| Start bp | 610733 |
|---|
| End bp | 611524 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 644978625 |
|---|
| Product | Tetratricopeptide TPR_2 repeat protein |
|---|
| Protein accession | YP_003136381 |
|---|
| Protein GI | 257058493 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0457] FOG: TPR repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.453663 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGGA AGATTAATTT ATCCAATTTT TTACTATTTT TATCTTTAAT ACTAGGATGT
TTTGTCTTTT TAGGATGTTC AACTAATTCG TCTCAATCAA TTCCTAAAAC GTCTGAAATC
CCTATCACAA AAAATCAAAA GCCTATTGAA ACTACTGCAC CGACTACTAC TGCTGAAGAT
CGCAAAAATG CAGCAAACCT AAGACAATTA GGGTTACAAT ATCGTCAACA AGAGAACTAT
CCTAAAGCCA TTGAATCTTT AGAGAAATCC GTTTCCCTTG ATTCAAAAAA TCTTTCAGGG
TTAGTATTAT TAGGATGGAC ATTACATTTA GCTGGTAAAT CTCCATCAGC ACAGCAAACC
CTCGAACACG CATTAACTAT TAATTCTCAG CATATTGAGA CATTAAATGC GTTAGGAATT
GTTTATTTAG TTCAAGGGAA TTTAGAACAA GCGATCGCTA CCCATACCAA AGCAGTTACT
ATTAATCCTA ATAACGAAAT TGCTCACTAT AATCTTAATC TAGCTTATCA ACGGTTACAA
CAATATACTA AAGCCATTAA ACATGGCCAA CAAGCGATTA AACTTGAACC CCATAACCCT
CATCCTTGGG TTGCTTTAGC TATTACTTAT TGGGAAATGG GAGACAGAAA GAAAAGTCAC
GAAACCTATC GTCAAGCAGT TAATTTAGAT AGCCGTTATC GTCAATTTAA TTTTTTATAC
CATCTAAAAC AAGCTGGATT TAGCCAAGAA CAAATCAAGC AAACTCAAAA GGTTTTAGAG
TCTTTATTTT AA
|
|---|
| Protein sequence | MNRKINLSNF LLFLSLILGC FVFLGCSTNS SQSIPKTSEI PITKNQKPIE TTAPTTTAED
RKNAANLRQL GLQYRQQENY PKAIESLEKS VSLDSKNLSG LVLLGWTLHL AGKSPSAQQT
LEHALTINSQ HIETLNALGI VYLVQGNLEQ AIATHTKAVT INPNNEIAHY NLNLAYQRLQ
QYTKAIKHGQ QAIKLEPHNP HPWVALAITY WEMGDRKKSH ETYRQAVNLD SRYRQFNFLY
HLKQAGFSQE QIKQTQKVLE SLF
|
|---|
| |