Gene Cyan8802_0540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_0540 
Symbol 
ID8389846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp538139 
End bp539185 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content30% 
IMG OID644978567 
Productleucine-rich repeat-containing protein typical subtype 
Protein accessionYP_003136323 
Protein GI257058435 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.855792 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTACAAA CAAAACAGAG TATTTTAACA CTAATTGCTA GATTTATTGT TGGTGTTGTT 
TTAGCTTTGC TCATTAGTCA AACATGGCTC AAATATTCAT CGACTAATGC TGCTACGGCT
TTTACTCAGT TATGTTTACA AAAACAACAA CTTTCTGAAT CGAGTCAGTA TACGGTTTCG
CTTCTCTTAA ACCAAGTACA AACAACAGAT TGTTTTGTTG CCTCAAGTCA ATTAGCTAAG
GTTCATGAAT TAGATTTATC CCACACTAAT ATACAAGACT TAACTCCTCT TGCTTCTTTA
AATCAACTAA CTAAATTATA TCTAGCTGAT AATCAAATTT CCGATATTAC TCCCCTGACT
GCTTTAACAC AATTAACCAC CCTAGAATTA TCGAACAACC AAATTACTGA CATCAGTGCT
TTATCAGAAA TGAAAACATT AACCACACTT TGGATGTGGA ATAATCAAGT AGAAGATTTA
ACTCCATTAT CTTCCTTAGC AGCGTTAAAT CGTTTATATG TTCCCTTTAA TAAAATTTCT
GATCTAACTC CTTTGTCCTC ATTAAAAAAC ATTGAAGTAT TAATTTTAGA TACCAATGAA
GTCAGGGATA TATCTTCTCT ATCTAATCTG GATAATTTAA AAGGTATTTC TTTAATAAAT
AATTCTATTG AAAATCTTGA GCCTTTATCA AACTTGACAA AATTACAAAC TTTAATTGTT
TCTAAGAACA AAATTTCTAA TGTATCTCCT TTATCTCAAG TTTCTTCTCT CAAAAATCTG
ATAATAGATG ACAATAATGT TTCTAATTTA CAGCCTTTAT CCTTGCTTAA GGATATAAAA
TTGCTGTATT TACACAACAA CAATATAAAT GATATTCAGC CATTATCGCA TTTACAAACT
CTGTCCGAAC TTAAATTACA AAATAACAAA ATTATCGATC TTTCTTCCCT ATCTTCCTTA
AAGAAATTAA AAGTTTTAAA TGTTGCCAAC AACCCGCTAA AAAGCCTAAT CTGTCCTGTT
GAACCTAGCT CAGTTTGTGA GTTCTAA
 
Protein sequence
MLQTKQSILT LIARFIVGVV LALLISQTWL KYSSTNAATA FTQLCLQKQQ LSESSQYTVS 
LLLNQVQTTD CFVASSQLAK VHELDLSHTN IQDLTPLASL NQLTKLYLAD NQISDITPLT
ALTQLTTLEL SNNQITDISA LSEMKTLTTL WMWNNQVEDL TPLSSLAALN RLYVPFNKIS
DLTPLSSLKN IEVLILDTNE VRDISSLSNL DNLKGISLIN NSIENLEPLS NLTKLQTLIV
SKNKISNVSP LSQVSSLKNL IIDDNNVSNL QPLSLLKDIK LLYLHNNNIN DIQPLSHLQT
LSELKLQNNK IIDLSSLSSL KKLKVLNVAN NPLKSLICPV EPSSVCEF