| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_0516 |
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| Symbol | |
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| ID | 8389822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 8802 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013161 |
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| Strand | - |
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| Start bp | 506363 |
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| End bp | 509683 |
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| Gene Length | 3321 bp |
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| Protein Length | 1106 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644978544 |
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| Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
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| Protein accession | YP_003136300 |
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| Protein GI | 257058412 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.835535 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000284408 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTTACTCT CCTTTGCCAA CGCTTTTATT AAACGACCCG TTCTCAGTAC TGTCTGCACC
ATTGTCATTA TCCTCTTGGG GACGATCGCC ATGGCATTAT TGCCCCTGGA TAAATTGCCA
GAAATTGCCC CAAAAAAAGT AGCCGTATCC GCTAATTACA TCGGTGCTGA TGCCAAAACC
ACCGAAGATA ACGTCACCAC CGTCCTAGAA CGAGAAATCA ACGGAACCGA ACAAGTCAGG
TGGATTGACT CCTTCACCGA TAATACGGGA AATGTCACCG TTAACGTCAC CTTTCCGACG
GAAATGGATC GTAATACTGC TCAAGTGTTA GTCCAAAACC GAGTTTCTCA AGCGCAATCC
ACCTTACCCT CGGTAGTGAA CCAAGCCGGA CTCAGAACCA ACACCCAATC CCCCAGTTTA
ACCCTGGTAT ATGGATTTTA CGTCGAAAAC GGTCCCGATG GTCAGCCCTT GTACGACACG
ACCTTTATCT ACAACTACGT CGATCGCTAC ATCTGGAACG ACATGAAAGG GCTGCCGGGG
GTGGGTTCAG TTGCCCTATT TGGGGGAGCA AACTATGCCA TGCGAATTTG GCTAGATCCC
GATAAATTAG CCGCTAGAGG ACTGACAGCC TTAGATGTGG TGGGGACGAT CAACGAACAA
AATTTTGAGG TAGGGATTGG GAGAATTGGA CAACAACCTG CCCCACAAGA CCAGCAGTTT
GAATTGCCCT TGCGAGTAGC TGGAAGATTT ACCAACGTCG CCGAAGCCGA AGATATGGTG
GTCAAAGTGG GAGAAGATGG CACGTTAATC CGTATCAAAG ATGTAGGCTA TGCCGAATTG
GGGATGGAAA ACTATGATAC CAAAGTTAAT GTAGATGGTA ATCCAGGGGT TGCCTTTTTA
ATCTATCAGT TACCTGGAAG TAATGCCCTC GAAACGGCAG ACGCAGCTAA AGCAAAAATG
GCAGAGTTGC AACAGAGTTT TCCCCCTGGG TTAAAGGTAG TTATCGGGTT AGACAATACC
CTGTTTGTCA ATGCGTCCCT CGAAGATTTA ATGATCACCT TACTACAGGC GATCGCCTTA
GTTGTCCTGG TGATCTTTGT TTTCCTCCAA GACTGGCGTA CCACTGTTAT TCCCGCGATC
GCCATTCCCG TCGCCTTAGT CGGGGCAATG ATTGGCTTAA AAGCCTTTGG GTTTACCCTC
AACCAATTAA GTCTGTTTGC TTGCGTTTTA GCCACAGGGT TAGTGGTAGA TGATGGGATC
GTAATTGTTG AAGCGGTTTC AAACAAATTA TCCCAAGGAA TGCGCCCTAG GCAAGCAGCC
ATGGACGCGA TGGATGAACT ATTCGGGGCA ACCATTGCTA CCTCGGTAGT CTTGATGGCG
GTGTTTGTTC CCGTGACATT CTTCCCCGGT ACAACGGGGA TCGTTTACCG TCAGTTTGCC
TTAACGATTA TTTTTGCGGT GGCGTTTTCC ACCTTTAACG CCTTGACCTT CTCCCCTACC
ATGTCGGCCA TTTTGCTGAG CCCTCCCCAA CCAAAACATG GACCTTTAGC CCTCTTTTTT
AATTGGTTTA ACCGAGGCTT CGATCTGGTT CGGGAAGGAT ATCGGCGTTT TATCAATTTT
CTAACTCATG TTCGTATTCT CGTGATGGTG GTCTTTATTG CAGGGTTAGT CGGGACAGCC
TGGATTTATC AGACCATGCC CTCCGGGTTC ATTCCGGCTG AAGATCAAGG CTATTTCTTC
GGCATTACGG AAGCCCCTCC AGGAGTTTCT CTGAACTACA CCTATGCCAT TGATCGCCAG
ACCACCCAAA TTATTCAAAA TATGGAAAAC GCCGATCAGG TGTTAGATCA TGTGATTTCT
TTAACGGGGT TTTCCTTTGA AGGAAGAAAT GCCAACAAAT CCCTGACCTT CGTCAAATTA
AAGCCCTGGG GAGAACGCCC CGGCCCCCAA AAATCTGCCT TTGGGATTAT TCAAAAGCTC
AATCGAGCCT TTGCTCAACA AATCTCCGGG GCGCGGGTAT TTGCAGCTAA TGCCCCTCCT
GTGGATGGGT TAAGTAGTTT TGATGGGTCT GAAATTTTTA TCCAAGACCG TCAATTAAAG
GGGATAGACG CTCTAATTGA GAATGTGCAA CGGGTGATGG CAGCCGCCAA TCAACGGCCA
GAAATTGGGT CAACCTTTAC GACCTTTACC TTCAATAGCC CTTTGATCAC CATGGAGATT
GATCGCCAAA AGGCTAAAGC CCAAAATATC GCCATTGATG ACATTTTAAG AACCCTACAA
ACCTATATTG GCTCCAATTT TGTCAATCAA TTTGTTTTTG AAGGTCGTCT CTATCGGGTT
TATGCTCAAG CAACCCCACA AGATCGGGCG AACCCTGAAG ATATTGGACG GTTGTATGTG
CGATCGCGTG ATGGAGCGAT TGTCCAATTG AGCAATTTAG TCACCCCAAC CCAAACCACC
TATCCTCCCA TTCTGACCCG TTATAAGACC TATCCAGCTA TTAAATTGAT TATTTCTCCT
GCTCCGGGTT ATAGTTCAGG ACAGGTGATT CAAGCCATGG AAGAAGTCGC CAATGAGACG
TTACAGCCGG GTTTTGGCTA CGCCTGGACG AATACGGCAG CCGAGGAAAA AAGCTCTGGT
GGGGCTGCTC CCATCGTCTT TGGTTTAGCC TTTGTCATGG TGTTCTTGGT ACTGGCTGCT
CAGTATGAAA GTTATATTGA CCCCACTATC ATCCTACTCA CGGTTCCTCT AGCCATTTTG
GGGGCATTGG GGGCAATTTG GATACGGGTC AGCTTTGTTC AAACGGCTCC CTTTAACCCC
GGTAATGGCA TCTGGCCGAT CCTTAATAAC AATATGTACG CTCAAGTAGC TTTAGTTATG
TTGATCGGAT TAGCAGCCAA AAACGCGATT TTGATCGTAG AATTTGCGAA CCAAGCCCGT
GATTTGGGCA TGACCATTAC GAGATCAGCG ATTTATGCTG CCGAAGAACG CTTACGCCCC
ATTTTGATGA CAGCCGTCTC GTCTCTCGTC GGGTTTGCCC CTCTATTAAC CGCTTCTAGT
GTGGGTGCAG TCAGTCGTTG GTCATTAGGG ACGGCTATTT TTGGCGGGTT AGCCTTAGCC
ACGGTCTTAA GTTTAGTTCT CGTTCCCATC TTGTATATTG TGGTCAAGAA CTTTGAAAAA
TACCTCCTCG ACGGAGGCAA AAAACCTCCG AGTCCCCCTA GTTCGGGTAA TGGTCACAGT
AAACCGTCTC CCCCTCCTGA ACCTCAACCC GAAAACGAGG AAATTGCCCC TGTGTTTAAA
ACCAGTCCTC AGAATGAGTA G
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| Protein sequence | MLLSFANAFI KRPVLSTVCT IVIILLGTIA MALLPLDKLP EIAPKKVAVS ANYIGADAKT
TEDNVTTVLE REINGTEQVR WIDSFTDNTG NVTVNVTFPT EMDRNTAQVL VQNRVSQAQS
TLPSVVNQAG LRTNTQSPSL TLVYGFYVEN GPDGQPLYDT TFIYNYVDRY IWNDMKGLPG
VGSVALFGGA NYAMRIWLDP DKLAARGLTA LDVVGTINEQ NFEVGIGRIG QQPAPQDQQF
ELPLRVAGRF TNVAEAEDMV VKVGEDGTLI RIKDVGYAEL GMENYDTKVN VDGNPGVAFL
IYQLPGSNAL ETADAAKAKM AELQQSFPPG LKVVIGLDNT LFVNASLEDL MITLLQAIAL
VVLVIFVFLQ DWRTTVIPAI AIPVALVGAM IGLKAFGFTL NQLSLFACVL ATGLVVDDGI
VIVEAVSNKL SQGMRPRQAA MDAMDELFGA TIATSVVLMA VFVPVTFFPG TTGIVYRQFA
LTIIFAVAFS TFNALTFSPT MSAILLSPPQ PKHGPLALFF NWFNRGFDLV REGYRRFINF
LTHVRILVMV VFIAGLVGTA WIYQTMPSGF IPAEDQGYFF GITEAPPGVS LNYTYAIDRQ
TTQIIQNMEN ADQVLDHVIS LTGFSFEGRN ANKSLTFVKL KPWGERPGPQ KSAFGIIQKL
NRAFAQQISG ARVFAANAPP VDGLSSFDGS EIFIQDRQLK GIDALIENVQ RVMAAANQRP
EIGSTFTTFT FNSPLITMEI DRQKAKAQNI AIDDILRTLQ TYIGSNFVNQ FVFEGRLYRV
YAQATPQDRA NPEDIGRLYV RSRDGAIVQL SNLVTPTQTT YPPILTRYKT YPAIKLIISP
APGYSSGQVI QAMEEVANET LQPGFGYAWT NTAAEEKSSG GAAPIVFGLA FVMVFLVLAA
QYESYIDPTI ILLTVPLAIL GALGAIWIRV SFVQTAPFNP GNGIWPILNN NMYAQVALVM
LIGLAAKNAI LIVEFANQAR DLGMTITRSA IYAAEERLRP ILMTAVSSLV GFAPLLTASS
VGAVSRWSLG TAIFGGLALA TVLSLVLVPI LYIVVKNFEK YLLDGGKKPP SPPSSGNGHS
KPSPPPEPQP ENEEIAPVFK TSPQNE
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