| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_0484 |
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| Symbol | |
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| ID | 8389790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 8802 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013161 |
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| Strand | - |
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| Start bp | 481155 |
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| End bp | 483065 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644978520 |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_003136276 |
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| Protein GI | 257058388 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0190528 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACATAA GTGATATTAC TCATCCGAAT CAATTGCATG GACTATCCAT CCGGCAACTG
GAAGACGTAG CCCGTCAAAT TCGAGAAAAG CACCTACAAA CCATCGCAGC AACAGGGGGA
CACCTTGGCC CCGGTTTAGG GGTAGTCGAA TTAACCATCG CCCTCTATCA AACCCTAGAC
TTAGACCGCG ATAAAGTGAC CTGGGACGTG GGACACCAAG CCTATCCCCA CAAAATGCTA
ACCGGCCGTT ATAAAAATTT CCACACCCTA CGACAAAAAG ACGGTATTGC AGGATATCTT
AAACGTTGTG AAAGCAAATT TGACCATTTT GGAGCCGGAC ACGCTTCTAC AAGTATTTCT
GCGGCGTTAG GCATGGCTTT AGCCAGAGAT GCCCAAGGGG AAGACTACAA GGTCGTAGCT
GTTATCGGGG ATGGAGCCCT TACGGGGGGT ATGGCCTTAG AAGCCATCAA CCACGCAGGA
CATTTACCCC ATACTAATCT GATGGTGGTC TTAAACGACA ATGAAATGTC CATTTCTCCC
AATGTTGGGG CAATTTCTCG CTATCTCAAC AAAGTTCGCC TCAGTGACCC CGTTCAGTTC
CTCGCCGACA ACCTCGAAGA ACAATTCAAA CACTTGCCCT TTTTTGGCGA TTCCCTGAGT
CCGGAGATGG AACGGGTTAA AGAAGGGATG AAACGCCTGG CAGTGTCTAA AGTGGGGGCT
GTGATTGAAG AATTAGGGTT TAAATACTTC GGTCCGATCG ACGGTCATAA CCTACAAGAA
CTCATTAGTA CCTTTAAACA GGCTCATAAA GTCACTGGAC CCGTTCTCGT TCACGTTGCC
ACCGTTAAAG GAAAAGGCTA CGAATTGGCG GAAAAAGACC AAGTGGGCTA CCATGCTCAA
AGTCCTTTTA ATTTAGCCAC GGGTAAGGCT ATCCCGTCGA GTAAACCGAA ACCCCCCAGT
TACGCCAAAG TCTTCGCCCA TACCCTGACC ACCCTAGCGG AAAATAACCC CAAAATTATC
GGTATTACCG CAGCCATGGC TACGGGAACC GGACTCGATA AACTTCAGGC AAAACTGCCA
AAACAATACA TTGATGTGGG TATCGCCGAA CAACACGCCG TTACCCTAGC TGGTGGCTTA
GCTTGTGAAG GAATGCGTCC CGTAGTAGCG ATTTACTCGA CTTTCCTGCA ACGAGCCTAT
GACCAAGTGC TCCATGATGT CTGCATTCAA AACCTTCCCG TTTTCTTCTG TATGGACCGC
GCAGGAATTG TCGGGGCAGA CGGTCCGACT CACCAAGGAA TGTACGATAT CGCCTATCTG
CGCTGTATTC CCAATATGAC CATTATGGCT CCCAAAGATG AGGCGGAATT ACAACGCATG
ATCGTGACGG GGGTTAATTA CACTGATGGA CCCATTGCCA TGCGCTATCC TCGTGGGAAT
GGGATTGGTG TCCCCCTGAT GGAAGAAGGG TGGGAACCTC TGCCTATTGG GAAAGGCGAA
ATTCTCCGCA ATGGAGATGA TCTGTTGATT CTGGGTTACG GCACTATGGT TAATACGGCT
TTACAAGCGG CGGAAACCCT CCGAGAACAC GGCATCGAAG CTACGGTACT TAATGCCCGT
TTTGTTAAAC CCTTGGATAC AGAGCTAATT CTACCCTTAG CTCAACGCAT CGGCAAAGTT
GTCACCCTTG AAGAGGGTTG TCTGATGGGC GGTTTTGGGT CTGCTGTGGC AGAAGCGTTC
TCTGACCATA ATGTGTTAGT TCCTCTCAAA CGCTTTGGTG TTCCCGATCG CTTAGTGGAT
CATGCTACCC CCGATCAATC AAAAGCCGAT TTAGGCTTAA CTAGCCCCCA AATTGCGGAA
CAAATTCTCC AAGTTTTCTT TAGTAATCGA CAACCTTCGA TGGTGAGTTA A
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| Protein sequence | MHISDITHPN QLHGLSIRQL EDVARQIREK HLQTIAATGG HLGPGLGVVE LTIALYQTLD
LDRDKVTWDV GHQAYPHKML TGRYKNFHTL RQKDGIAGYL KRCESKFDHF GAGHASTSIS
AALGMALARD AQGEDYKVVA VIGDGALTGG MALEAINHAG HLPHTNLMVV LNDNEMSISP
NVGAISRYLN KVRLSDPVQF LADNLEEQFK HLPFFGDSLS PEMERVKEGM KRLAVSKVGA
VIEELGFKYF GPIDGHNLQE LISTFKQAHK VTGPVLVHVA TVKGKGYELA EKDQVGYHAQ
SPFNLATGKA IPSSKPKPPS YAKVFAHTLT TLAENNPKII GITAAMATGT GLDKLQAKLP
KQYIDVGIAE QHAVTLAGGL ACEGMRPVVA IYSTFLQRAY DQVLHDVCIQ NLPVFFCMDR
AGIVGADGPT HQGMYDIAYL RCIPNMTIMA PKDEAELQRM IVTGVNYTDG PIAMRYPRGN
GIGVPLMEEG WEPLPIGKGE ILRNGDDLLI LGYGTMVNTA LQAAETLREH GIEATVLNAR
FVKPLDTELI LPLAQRIGKV VTLEEGCLMG GFGSAVAEAF SDHNVLVPLK RFGVPDRLVD
HATPDQSKAD LGLTSPQIAE QILQVFFSNR QPSMVS
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