| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_0150 |
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| Symbol | |
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| ID | 8389453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 8802 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013161 |
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| Strand | - |
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| Start bp | 154651 |
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| End bp | 155790 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644978197 |
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| Product | RNA polymerase, sigma 70 subunit, RpoD subfamily |
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| Protein accession | YP_003135956 |
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| Protein GI | 257058068 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02997] RNA polymerase sigma factor, cyanobacterial RpoD-like family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00526884 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00120338 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGCAGG CTAATGACCT ACTAACCCTT ACAGAGCCTC AAATCGATTT ACCCTTCTTC
ATCGATCCCG ATGAAGGCGA AGAAATAGAG CTAATGACTG ATGAGGCTCT TGACGAGGTA
ATGGCTAACC CAGAAGGGAA AAAAACCCGA AAGCTTAGTG CTTCTCGCCG CCGCGATCCC
AACAAGAAAA AGCCTTATAC AGAAGACTCC ATTCGGATTT ACCTCCAAGA AATCGGTCGC
ATTCGACTAT TGCGCGCGGA AGAAGAGATT GAACTGGCGC GTAAAATTGC GGATTTACTG
GAATTAGAGA GAATCCGCGA AAAAATGACC GAACACATGG GACGCTTCCC CACGGATCTC
GAATGGTCAC AGGCGATCAA TATGGAGTGG CACGCTTTTC AGCGTCGTCT CTATCTGGGG
CGCAAAGCCA AGGACAAAAT GGTCCATTCT AACCTGCGTC TAGTGGTTTC GATTGCCAAA
AAATACATGA ATCGGGGGTT ATCTTTTCAA GATTTAATTC AAGAAGGTTC CCTGGGCTTA
ATTCGGGCGG CTGAAAAGTT TGACCACGAA AAAGGGTATA AGTTTTCGAC TTACGCCACT
TGGTGGATTC GTCAAGCTAT TACCAGAGCG ATCGCTGATC AATCCCGTAC GATTCGTCTT
CCAGTGCACC TGTACGAAAC CATCTCTCGG ATTAAGAAAA CCACCAAGAT TCTCTCCCAA
GAGATGCGCC GAAAACCGAC AGAAGAGGAA ATTGCGACTC GCATGGAGAT GACCATCGAA
AAGTTACGGT TTATTGCTAA ATCCGCCCAA TTACCCATAT CCCTTGAAAC CCCCATTGGT
AAGGAAGAAG ATTCCCGCCT GGGGGATTTT ATTGAGGCTG ATGGGGAAAA TCCTGAAGAT
GAGGTGTCGA AAAATCTCCT ACGCGAAGAT CTCGAAAATG TCCTCGATAC CCTTAGTCCA
CGGGAACGGG ATGTGCTGCG GTTGCGGTAC GGGTTAGACG ATGGACGAAT GAAAACCCTC
GAAGAAATTG GACAGATCTT TAATGTTACC CGTGAGAGAA TCCGTCAAAT TGAGGCTAAA
GCACTACGAA AGCTCCGTCA TCCCAACCGC AATAGTATTC TTAAAGAATA CATTCGGTAA
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| Protein sequence | MTQANDLLTL TEPQIDLPFF IDPDEGEEIE LMTDEALDEV MANPEGKKTR KLSASRRRDP
NKKKPYTEDS IRIYLQEIGR IRLLRAEEEI ELARKIADLL ELERIREKMT EHMGRFPTDL
EWSQAINMEW HAFQRRLYLG RKAKDKMVHS NLRLVVSIAK KYMNRGLSFQ DLIQEGSLGL
IRAAEKFDHE KGYKFSTYAT WWIRQAITRA IADQSRTIRL PVHLYETISR IKKTTKILSQ
EMRRKPTEEE IATRMEMTIE KLRFIAKSAQ LPISLETPIG KEEDSRLGDF IEADGENPED
EVSKNLLRED LENVLDTLSP RERDVLRLRY GLDDGRMKTL EEIGQIFNVT RERIRQIEAK
ALRKLRHPNR NSILKEYIR
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