Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_0123 |
Symbol | |
ID | 8389426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | + |
Start bp | 128376 |
End bp | 129800 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644978170 |
Product | diaminopimelate decarboxylase |
Protein accession | YP_003135929 |
Protein GI | 257058041 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.251884 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0757404 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTATCGA CAGAGCCAAG GACAAGCCAT TCTGGACAAG ACTACTTAGA CACCAACCCT CTAGAACAAG TTCAGCGATC GCCCAATCAA TCTTTATTAC CCCTAACCGC TACTGTTAAC AAACAAGATC GCCTAGAAAT TGGCGGTTGC GATCTTCAGA CCCTAGTTAA GCAGTTTGGT TCCCCTCTCT ACGTCCTTGA TGAAGCAACC CTGCGAACAG CCTGTCGTCA GTATAGAGAG GCCTTTAACA CCTACTATCA AGGAACCTCC CAAGTCATTT ACGCCTCAAA AGCCTGGAGT TGCTTAGCGA TCGTCAGTAT TGTCGCCAGT GAAGGATTAG GGTTTGATGT GGTTTCTGGG GGAGAACTCC ATACCACCAT CAAAGCGTTA GAAGCCATGG GATGGTCAAC GGAACAAATC GCGCAACAAA TTTACTTTCA CGGCAATAAC AAGTCACACC AAGAGTTAAT CTTCGCCATT GAGATTGGCT GTACGATTAT CGTTGATAAT TGGTTAGAAC TAGAAACCTT AGTTAAATTA GGCAATCAGA CGGGAACCCT AAGCATTCCC ATTTTACTCC GCTTAACCCC CGGGATAGAA TGTCATACCC ACGAATACAT TCGCACTGGA CATCTAGACA GTAAATTCGG CTTTGATCCC AATCAACTCG ATGCTGTGTT TACTTATGTT AGCCAACAAC CGACCTTAGA CTGTCGCGGC TTACACGCCC ATATTGGATC ACAAATTTTT GAGCGTCAAC CCCATCAAGA TTTAGGCTTA GTGATGGTGG AATGGCTCAA AAAAGCGCAA AATCACGGCT TAGTGCTGCA AGAATTGAAC ATTGGCGGCG GCTTAGGCAT CCGATATGTG GAATCCGATG ATCCTCCAAG TATTGAACAA TGGGTTAAAA CCGTCAGTGA GTCGGTGATG AAAGCCTGTG AAATCCATCA ATTACCCCTG CCTAAACTCA TCGCTGAACC CGGACGGTCT CTCGTCGGAC CCGCTTGCGT CACCGCTTAT ACCATTGGCA GCCGCAAAGA AATTCCCCAA CTGCGAACCT ACATTGCCGT TGATGGCGGA ATGTCCGATA ATCCCCGTCC AATAACCTAT CAATCCCGTT ATCGGACCGT TGTAGCCAAT CGAATGTCAG AACCCTGTAC AGAAACTGTG ACTATTGCGG GTAAACATTG CGAATCAGGG GATATTTTAA TTAAGGATGC TCAGTTGCCT CAAACCCAAC CAGGGGATAT TCTGGTAGTG ATGGCAACAG GAGCCTATAA CCATAGTATG GCTTCTAACT ATAATCGGTT GCCCCGTCCG GCAGCCGTAT TAGTTCAGGA GGGAGAAGCG AATCTGATTG TGCAACGAGA AACCTATGAG GATCTCCTTC GTCAAGATCG GCTTCCTCAA AGGCTTCTGT CTTAA
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Protein sequence | MLSTEPRTSH SGQDYLDTNP LEQVQRSPNQ SLLPLTATVN KQDRLEIGGC DLQTLVKQFG SPLYVLDEAT LRTACRQYRE AFNTYYQGTS QVIYASKAWS CLAIVSIVAS EGLGFDVVSG GELHTTIKAL EAMGWSTEQI AQQIYFHGNN KSHQELIFAI EIGCTIIVDN WLELETLVKL GNQTGTLSIP ILLRLTPGIE CHTHEYIRTG HLDSKFGFDP NQLDAVFTYV SQQPTLDCRG LHAHIGSQIF ERQPHQDLGL VMVEWLKKAQ NHGLVLQELN IGGGLGIRYV ESDDPPSIEQ WVKTVSESVM KACEIHQLPL PKLIAEPGRS LVGPACVTAY TIGSRKEIPQ LRTYIAVDGG MSDNPRPITY QSRYRTVVAN RMSEPCTETV TIAGKHCESG DILIKDAQLP QTQPGDILVV MATGAYNHSM ASNYNRLPRP AAVLVQEGEA NLIVQRETYE DLLRQDRLPQ RLLS
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