| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_0083 |
|---|
| Symbol | |
|---|
| ID | 8389386 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | - |
|---|
| Start bp | 88225 |
|---|
| End bp | 89799 |
|---|
| Gene Length | 1575 bp |
|---|
| Protein Length | 524 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644978130 |
|---|
| Product | carbohydrate kinase, YjeF related protein |
|---|
| Protein accession | YP_003135889 |
|---|
| Protein GI | 257058001 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0063] Predicted sugar kinase |
|---|
| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.452837 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAAT TAGACGCATT TGATCCCCTT GAATCTATTG TCGTGACGGC TGATCAAATG
GGGAAAATTG AAAGCAGACT CTTTGAAGCA GGAATGCCGG TTGCTGCTTT AATGGAAAAG
GCTGCCTTAT TAATGTCTCG ACGCATCCAA GAACTTTACC CGCTTTCTAA TCTGTCACGG
GTGGGTATTT TAGTGGGTCC AGGCCATAAT GGTGGAGATG CTTTAGTGAT TGCTAGAGAA
TTACATCTAC AAGGCTATAA TGTTTGTTTA TATCGCCCGT TCATTCAATC AAAAGAATTA
ACGAATCAAC ATTTAAAATA CGCCCAAAGT TTAGGCATTC CTTACTCTCA AGAAATTGAA
TTTTTAGATA ATTGTGAGTT AATTATTGAT GGGCTATTTG GCTTTGGATT AACTAGAGAA
ATATCAGGAC ATATTGACCA AGCAATAGAG TTTATTAATC ACCTTAATAT CCCTATTATT
AGTGTTGATA TTCCTTCAGG ATTAAACACC GATACGGGGA AAATTTTAGG AATAGCCATT
AAAGCTACTT ATACCCTTTG TTTAGGGCTA TGGAAACCTG TATTTTTTCA AGATCAAGCT
TTAGAATATC TCGGAAAAGT CGAACGGATT AATTTTGGTA TTCCTCCTAA AGATGTTTGG
GCAATTGTTT CAAAACCTGC CCCTTTACAA ATTTTAACCC CAACCCTCGC GCAAAGGTTT
TTACCCTTAC CTCGTCCCCT TGTCACCCAT AAATATCAAC AGGGACATCT TCTGCTGATT
TGCGGTTCTC GTCGCTACGC AGGGGGTAGC ATTTTAACGG GGTTGGGAGC CCGTAGTAGT
GGAGTAGGAA TGCTGTCTAT AGCTGTTCCT GAGTCCCTAA AACCTCTGTT AGTCAGTCAT
TTACCCGATG CGTTAATTAT TGACTGTCCC GAAACGGACA ACGGTGCGAT CGCAGAACTC
CCTCCTCTAG CCGCAGATTT TAATAATTAC GATATCATCG CCTGTGGACC AGGATTAACG
CAAGAAGTGA CATCAGTCGT TGAAAAAGTC TTGAAGGCAA ACTGTCCCGT GATTTTAGAT
GCGGATGCGT TGAATATTTT AGCCAAATTA GGAACCATGG ACTCTCTCTC TCAACGCAAG
GCTACCACGA TATTAACGCC CCATTTAGGG GAATTTAAGC GACTTTTCCC GAATATTTTT
GATCCTGGTT GCGATCGCAT TGCTGCCGTT CGGACAGCAG CGCAAGACAC TGGGGCGATT
ATTCTATTAA AAGGGGCTCG GACGGCGATC GCTACCCCTA ATGGTTCTGT ATGGCTGATT
TCTGACAGTA CACCTGCTTT AGCACGGGGG GGTAGTGGAG ATGTCCTAAC GGGGTTAATA
GGGGGCTTGT TGGCGCAAAA AACCGCCTCT GGAGGGAAGA TACAAACAGG GGTTGATGTA
GGGGGAATCG TTGCGACTGC TGCTTGGTGG CACGCACAAG CGGGAATTTT AGCAGCGAAA
GAACGTACTG AGTTAGGAGT AGATGCGTTT ACCCTATCTC AATGGTTGGT TAAAGTAGGT
ACTCTGCCAA AATAA
|
|---|
| Protein sequence | MMKLDAFDPL ESIVVTADQM GKIESRLFEA GMPVAALMEK AALLMSRRIQ ELYPLSNLSR
VGILVGPGHN GGDALVIARE LHLQGYNVCL YRPFIQSKEL TNQHLKYAQS LGIPYSQEIE
FLDNCELIID GLFGFGLTRE ISGHIDQAIE FINHLNIPII SVDIPSGLNT DTGKILGIAI
KATYTLCLGL WKPVFFQDQA LEYLGKVERI NFGIPPKDVW AIVSKPAPLQ ILTPTLAQRF
LPLPRPLVTH KYQQGHLLLI CGSRRYAGGS ILTGLGARSS GVGMLSIAVP ESLKPLLVSH
LPDALIIDCP ETDNGAIAEL PPLAADFNNY DIIACGPGLT QEVTSVVEKV LKANCPVILD
ADALNILAKL GTMDSLSQRK ATTILTPHLG EFKRLFPNIF DPGCDRIAAV RTAAQDTGAI
ILLKGARTAI ATPNGSVWLI SDSTPALARG GSGDVLTGLI GGLLAQKTAS GGKIQTGVDV
GGIVATAAWW HAQAGILAAK ERTELGVDAF TLSQWLVKVG TLPK
|
|---|
| |