| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_0053 |
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| Symbol | |
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| ID | 8389356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 8802 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013161 |
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| Strand | - |
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| Start bp | 55855 |
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| End bp | 57237 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644978101 |
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| Product | photosystem II 44 kDa subunit reaction center protein |
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| Protein accession | YP_003135860 |
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| Protein GI | 257057972 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01153] photosystem II 44 kDa subunit reaction center protein (also called P6 protein, CP43), bacterial and chloroplast
[TIGR03041] chlorophyll a/b binding light-harvesting protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000498494 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGTAACGC TCTCTAATGT TTCCGTTACC AGTGGACGTG ACCTAGAATC AACTGGTTTT
GCATGGTGGT CAGGCAATGC TCGTCTGATC AACCTCTCCG GTAAGCTTCT CGGTGCTCAC
GTCGCTCACG CTGGTTTGAT TGTTTTCTGG GCCGGGGCAA TGACCCTGTT TGAAACCGCC
CACTTTATTC CCGAAAAGCC CATGTACGAA CAGGGCTTAA TTCTCCTGCC CCACATTGCT
ACCCTCGGTT GGGGTGTAGG ACCTGGTGGT GAAGTAATTG ATACCTTCCC CTTCTTTGTT
GCAGGGGTAT TACACCTGAT TTCTTCTGCT GTTCTCGGTT TTGGTGGTAT TTATCACGCT
CTGCGTGGTC CTGAAACCTT AGAAGAGTAT TCCAGCTTCT TCGGTTACGA CTGGAAGGAC
AAAAACCAGA TGACCAACAT CATCGGTTAT CACCTAATTC TTTTGGGTTG TGGTGCGCTG
TTGTTGGTAT TCAAAGCCAT GTTCTTTGGT GGCGTTTATG ACACCTGGGC TCCTGGTGGT
GGTGATGTCC GGGTAATCAC CAATCCTACC TTAAATCCTG CCGTGATCTT TGGTTATCTG
ACCAAGGCTC CCTTTGGTGG CGAAGGTTGG ATTATTAGTG TCAACAACAT GGAAGATATT
ATTGGCGGTC ACATTTGGAT CGGCCTAATT TGTATCTTCG GTGGTATTTG GCACATTTTA
ACCAAGCCCT TTGGTTGGGC TCGTCGCGCC TTTATCTGGT CTGGTGAAGC TTACCTATCT
TACAGTTTAG GAGCTTTATC CATGATGGGT TTCATCGCGG CGGTTTTTGT TTGGTTTAAC
AACACCGCTT ACCCCAGTGA GTTCTATGGA CCCACCGGGA TGGAAGCATC TCAATCTCAA
GCTTTCACCT TCTTGGTTCG TGACCAACGC TTAGGGGCTA ATATTGGTTC TGCTCAAGGT
CCGACTGGGT TAGGTAAATA TTTAATGCGT TCTCCTACCG GTGAAATCAT CTTCGGTGGT
GAAACCATGC GTTTCTGGGA CTTCCGTGGT CCTTGGTTAG AACCCCTGCG CGGTCCTAAC
GGTCTAGACT TAGACAAGTT AAAAAATGAC GTTCAGCCTT GGCAAATTCG TCGCGCTGCT
GAATATATGA CCCACGCGCC TTTAGGTTCT TTGAACTCTG TGGGTGGGGT TATCACCGAT
GTTAACTCCT TTAACTACGT TTCTCCCCGT GCGTGGTTGG CGACTTCTCA CTTTACTTTA
GCTTTCTTCT TCCTGATTGG TCATCTGTGG CACGCTGGAC GTGCACGGGC GGCTGCGGCT
GGATTTGAGA AAGGGATTGA TCGTGAGACT GAACCCGTAC TGTCTATGCC TGACCTTGAC
TAA
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| Protein sequence | MVTLSNVSVT SGRDLESTGF AWWSGNARLI NLSGKLLGAH VAHAGLIVFW AGAMTLFETA
HFIPEKPMYE QGLILLPHIA TLGWGVGPGG EVIDTFPFFV AGVLHLISSA VLGFGGIYHA
LRGPETLEEY SSFFGYDWKD KNQMTNIIGY HLILLGCGAL LLVFKAMFFG GVYDTWAPGG
GDVRVITNPT LNPAVIFGYL TKAPFGGEGW IISVNNMEDI IGGHIWIGLI CIFGGIWHIL
TKPFGWARRA FIWSGEAYLS YSLGALSMMG FIAAVFVWFN NTAYPSEFYG PTGMEASQSQ
AFTFLVRDQR LGANIGSAQG PTGLGKYLMR SPTGEIIFGG ETMRFWDFRG PWLEPLRGPN
GLDLDKLKND VQPWQIRRAA EYMTHAPLGS LNSVGGVITD VNSFNYVSPR AWLATSHFTL
AFFFLIGHLW HAGRARAAAA GFEKGIDRET EPVLSMPDLD
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