Gene Cyan8802_0050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_0050 
Symbol 
ID8389353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp53319 
End bp54056 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content43% 
IMG OID644978098 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003135857 
Protein GI257057969 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism
[I] Lipid transport and metabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.795595 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCTG TTGTTATCAT TACGGGAGTA GCAGGAGGAA TTGGCTATGC AACGGCGCAA 
TATTTTGCCA GTCAAGGCTG GTCAGTCATT GGGGTTGATT GTCAAGAAAT AACCCAATTG
ATGGATATTG ATCATTACGT TAAAGCGGAT CTCTGCGATG CTGATCAAAT TGACGCTATC
ACTGAGAAAC TTGATAGACT TGATGGGTTG GTTAATAATG CAGCCGTACA AATTTGTAAA
CCGATCATCG AGATGGATGT GACTGAATGG GACCAAGTGA TGGCAGTCAA TTTACGTTCA
GCTTTCTTGT TGTCTAAAGC TGCCTATCCT TTGTTAAAAG TCAGTCAAGG AAGTGTGGTG
AATGTGAGTT CTGTTCATGC GATCGCCACT TCTGGGAATA TTGCTGCTTA TGCAGCTAGT
AAGGGGGGTT TAGCAGCATT TAGTCGCGCT TTAGCCATTG AATGGGCTAA CGATCAAATC
CGTGTCAATG CTATTTTACC AGGGGCGGTG GACACACCGA TGTTGCACGC GGGCTTAACC
AGGGGCCATC TTTCGGGCAA TAATGTCAAT GAGTTGATGA ATCAATTAGC CGCAAAAACC
GTCATTGGGA GGGTGGGAAA ACCAGATGAA ATAGCTAAAG GAATTTTCTT TTTAGCCAAC
AAAGAATTGT CGTCATTTAT AACCGGTCAA ACCTTGGTTA TAGATGGAGG GGCAACCATT
AGATTAAGCA CAGAATAA
 
Protein sequence
MKPVVIITGV AGGIGYATAQ YFASQGWSVI GVDCQEITQL MDIDHYVKAD LCDADQIDAI 
TEKLDRLDGL VNNAAVQICK PIIEMDVTEW DQVMAVNLRS AFLLSKAAYP LLKVSQGSVV
NVSSVHAIAT SGNIAAYAAS KGGLAAFSRA LAIEWANDQI RVNAILPGAV DTPMLHAGLT
RGHLSGNNVN ELMNQLAAKT VIGRVGKPDE IAKGIFFLAN KELSSFITGQ TLVIDGGATI
RLSTE