| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_0002 |
|---|
| Symbol | |
|---|
| ID | 8389305 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | + |
|---|
| Start bp | 1903 |
|---|
| End bp | 2955 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 644978050 |
|---|
| Product | diguanylate cyclase |
|---|
| Protein accession | YP_003135809 |
|---|
| Protein GI | 257057921 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2199] FOG: GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATACTG ATAATCATCC CTTGCATATT TTGGTCATTG AAGATAAAAA ATATAGACAA
ACAATCTCTT TAGAGAAAAA AATCTATTCC CTTGGGAGAC ATCCCAATAA TTCAATTCTT
ATTTGTGATC AAAAAGCTTC TCGATATCAT GCTACTCTAA TGCGTCGTCA AAAAGATTAT
AATGGTCATT ATTCCTATTG GATTGTCGAT GGAGATATGC AAGGCAATAA AAGTCTTAAT
GGGATCTATG TTAATGGAGA AAAATGTTTA GCAAAAGAAC TCAAAAATGG AGACTTAATT
AACTTTGGAT GTCAAGTTAA CGCTACCTAT CATGCGCTTA CTGATTGGTC AAATACAATT
GTTGATATTG ACAAAATAAA ATTCGATCCT TTCTCCAAAC AATCTCTTGA TTTAGAAGCA
GCGCATACCC CAACTTTAAC AGCTATGTCG TCAATTCAAA ATAATCACAT TCTTGGAGAA
ATTTTGCCTA ATCATCTCAA TTCTTATCAA TCTAATGCGA GTAATACTGA AGAAACTATC
TTGCCAGAAA ATTATCACGA TCCTTTAACA AAATTACCTA ATCAGTTTCT GTTTAGTGAG
CGTCTATCCT TAGCTCTTAA AAATGCTCAA CAAAATAATT CTTTAATGGC TGTTGCTTTA
TTAACTATTA ATCACTTCGA TCATATTTAT GAAGATTTTG GGTGTCCAAT AGCAGAACAA
TTATTACAAG AAATTGCTCA AACATTAAAT TCTAGCATTC GTTATGATGA TCTTGTTGCT
CGTCTAGGAA AAAATGAGTT TGGCTTTATT TTTCCTAAAA TTCGTTACGC TCAAGATCGA
GAAATAATAT GTGAGAAACT TCTTAACGCT GTAGCTCAAT CTTTGACATT ATCAGGCAAT
CAATTACAAC TAAGTGCCAA TATAGGGATC GCACTTTACC CCCACGATGG TCTTAATACA
GAAACCCTTT TACAACAAGC AAAAGTAATT TTACTTAATG ATTACAAGCA AGATCAAGAT
GTTCATAAAA ATCCTGCTTT TTTAACTTGT TAA
|
|---|
| Protein sequence | MNTDNHPLHI LVIEDKKYRQ TISLEKKIYS LGRHPNNSIL ICDQKASRYH ATLMRRQKDY
NGHYSYWIVD GDMQGNKSLN GIYVNGEKCL AKELKNGDLI NFGCQVNATY HALTDWSNTI
VDIDKIKFDP FSKQSLDLEA AHTPTLTAMS SIQNNHILGE ILPNHLNSYQ SNASNTEETI
LPENYHDPLT KLPNQFLFSE RLSLALKNAQ QNNSLMAVAL LTINHFDHIY EDFGCPIAEQ
LLQEIAQTLN SSIRYDDLVA RLGKNEFGFI FPKIRYAQDR EIICEKLLNA VAQSLTLSGN
QLQLSANIGI ALYPHDGLNT ETLLQQAKVI LLNDYKQDQD VHKNPAFLTC
|
|---|
| |