| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_4578 |
|---|
| Symbol | |
|---|
| ID | 8366396 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013160 |
|---|
| Strand | - |
|---|
| Start bp | 72488 |
|---|
| End bp | 74026 |
|---|
| Gene Length | 1539 bp |
|---|
| Protein Length | 512 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644978047 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_003135806 |
|---|
| Protein GI | 256818739 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
|---|
| TIGRFAM ID | [TIGR02730] carotene isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGAGACGG ACTTTATTAT TATTGGTAGC GGCATTGGGG GTTTGAGTTG CGCGGCTCTT
TTAGCTCGTT ATGGCCACAG CGTAACCGTT TGTGAAAGTC ATTCTATTCC GGGGGGAGCC
GCCCACAGTT TTGAGCGTAG CGGTTTTGTT TTTGATAGTG GACCCTCTTT ATATTCTGGA
CTCTCCTATA GTCCCTCGGC TAACCCCCTC AAACAAGTTT TGGATATTCT TGGAGAACCT
TTACCCTGTG TGACTTATGA TACTTGGGGC TGTTGTTTAC CCGAAGGTGA TTTTAAAACC
ACTGTGGGGG CTGACCAATT TTGTGATGTT TTAATGCAAT TGCGAGGGGA GGCCGCCGTG
AGTGAATGGC GTAAACTGCA ACAAGTGATG AAACCCCTCG GAACTGCTGT TCTTACCATT
CCGTCTGGGG CGATTCGGTT TGACGCGAAG GTTCTGTTCA CTGTCGGTCG TTTTATTCCA
CAGGCGATAG TCAGAGGCTC ACAATTGCTC CAACTAACAG GCCCCTTTAG TGACATTGCC
AACACGGTTA TTACAGATTC TTTTATTCGT CATTGGTTAG ATTTATTGTG TTTTCTTCTA
TCGGGACTAC CTGCTAAGGG CACCAGTGCT GCAGAAATGG CTTTTATGTT TGCCGACTGG
TATCGACCAG GTGTTGTCTT AGATTATCCC ATTGGGGGTA GTGGAGGCTT AGTCAAAGCT
CTAGTCAGGG GGTTAGAAAA GTTTGGGGGA CAATTACGCT GTTCAGCCCA TGTTTCAGAG
ATTTTGCTAG AAAATAAGCG TGCGGTGGGG GTACGTCTAC GCAATGGTGA AGTCATTCGA
TGTCAAAAAG GGGTAATTTC TAATGCTTCT GTTTGGGATA CCCTCGACTT AATTCGGGAT
CATGCGGTTT CGACCCAATG GCGAAGACAA CGAGAACAAA CCCCCGCCTG TGACAGTTTT
TTACATCTTC ATTTAGGCAT TGATGGGGCT AACTTACCCT CGGATTTAGC TTGCCATTAT
ATCGTAGTCA ATGACTGGAA AAAGGGGGTA AGAGCACCGC AAAATGTGGT TTTAATTTCG
ATTCCTTCTC TACTTGACCC CACCCTCGCA CCACCTGGTA AACAGACTAT CCATGTTTAT
ACCCCAGGTA ATGAACCCTA CTCGCTTTGG GAGGGCATGA AACGAGACAG TGAGGCTTAT
CAGCGACAAA AACAAGAACG GGCTGCGGTA ATGTGGCAAG CCTTAGAACG AATTATTCCT
GATATACGAT CTCGTTGTGA GGTGACATTA AGCGGAACTC CTTTGACCCA TGAACGCTTT
TTGCGCCGTA AGCGAGGTTC TTATGGACCA GGATTTCAAG CGGGGAAAGA GTCATTTCCT
TCTCCGTTAA CACCCGTACC TGGTTTATAT TGTTGTGGGG ATTCCACCTT TCCAGGGATT
GGTTTACCGG CCGTGGCCGC CAGTGGCATG ATGCTAGCCA ATACTTTTGC TTCCGTTTCT
CAACACTTAC AAATGTTACA AATGATCGCT CGATTCTGA
|
|---|
| Protein sequence | METDFIIIGS GIGGLSCAAL LARYGHSVTV CESHSIPGGA AHSFERSGFV FDSGPSLYSG
LSYSPSANPL KQVLDILGEP LPCVTYDTWG CCLPEGDFKT TVGADQFCDV LMQLRGEAAV
SEWRKLQQVM KPLGTAVLTI PSGAIRFDAK VLFTVGRFIP QAIVRGSQLL QLTGPFSDIA
NTVITDSFIR HWLDLLCFLL SGLPAKGTSA AEMAFMFADW YRPGVVLDYP IGGSGGLVKA
LVRGLEKFGG QLRCSAHVSE ILLENKRAVG VRLRNGEVIR CQKGVISNAS VWDTLDLIRD
HAVSTQWRRQ REQTPACDSF LHLHLGIDGA NLPSDLACHY IVVNDWKKGV RAPQNVVLIS
IPSLLDPTLA PPGKQTIHVY TPGNEPYSLW EGMKRDSEAY QRQKQERAAV MWQALERIIP
DIRSRCEVTL SGTPLTHERF LRRKRGSYGP GFQAGKESFP SPLTPVPGLY CCGDSTFPGI
GLPAVAASGM MLANTFASVS QHLQMLQMIA RF
|
|---|
| |