Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_39710 |
Symbol | |
ID | 8389292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 4300138 |
End bp | 4301478 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644977980 |
Product | transcriptional regulator with HTH domain protein and aminotransferase domain protein |
Protein accession | YP_003135739 |
Protein GI | 257057907 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTCCT CGCAGTCTCC GCAACCGGCG CAGTATCGGC CGGGCTCTGA ACCGGCTCGG CAGAAGCTCG ACCCGCACAT CGACCGTTAC GCCGCCCGTA CCGCGGGCAT GACGGCATCG GAGATCCGAG CGTTGTTCGC GGTAGCAAGC CGCCCCGAGG TCGTGTCGCT GGCCGGCGGT ATGCCGAACC TCGCGGCCCT GCCGTTGGAC TCCTTGTCGG AGCAGATGTC GGAACTCGTC GCCAGGGACG GGCTCGTCGC GCTCCAGTAC GGCTCCGCGC AGGGCGTCCC CGCGTTGCGG GAGCAGATCT GCGAGGTGAT GGCCATGGAA GGCATCACCG CCCACCCGGA CGACATCGTC GTCACCGTCG GCTCCCAGAT GGGGTTGGAC ATGGTGACAC GACTGTTCTG CGACCCAGGT GACGTCGTCA TCGCCGAAGG ACCGTCGTAC GTCGGCGCGC TCGGCTCCTT CGCGGCCTAC CAGGCGCAGG TCGTCCACGT CGCGATGGAC GACGACGGTC TGGTGCCCGA GGCGCTGCGT GAGGCCCTCG CCCAGGCGAA ACAGGAGGGG AAGCGGGTCA AGCTCCTGTA CACCATTCCG AATTTCCACA ACCCGGCGGG TGTGACGCTG TCCGTGGAGC GTCGCGCCGA GATCGTGGAG ATCTGCGCCG AGCACGACGT GCTCATCCTC GAGGACAACC CGTACGGCCT GCTCGGCTTC GACGGACAGA CCTACCCGTC GTTGCGTTCG ATGGCCCCGG ACAACGTCGT GTACCTGGGG TCGTTCTCCA AGACGTTCGC CTCCGGTCTG CGCGTCGGCT GGGTGCTCGC GCCACACGCG GTGCGGGAGA AGCTCGTATT GGCCGCCGAA TCCGCGACGC TGTGCCCACC GACTCTGAAC CAACTGGTCG TGTCGAAGTA CCTCGCCACC CACGACTGGA AGGGGCAGAT CAAGACTTTC CGGGAGAACT ACCGCGAACG GCGCGACGCC ATGTTGTCGG CGCTGGAACA GCACCTACCC GAGGGGTGCA CCTGGACGCG GCCGGAGGGT GGCTTCTACG TGTGGGTCAC CGTTCCCGAA GGCGTCGACA CCAAGGCCAT GCTGCCCCGG GCCGTGACGG CGCGGGTCGC GTACGCCTCC GGAACCGGTT TCTACGCCGA CGGCTTGGGC AGCCGGCAGA TGCGGTTGTC CTACTGCTAT CCCACCCCCG AACGCATCCG CGAGGGTGTT CGCCGGCTCG CCGGTGTGTT GGAGTCCGAG ATGGAGCTCA TGCGCACCTT CGGTAGCGTC ACCAGCCGTG CGGTCTCGGG GCCTCAGTTC CCCGGACCGG ACACCGCGTG A
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Protein sequence | MTSSQSPQPA QYRPGSEPAR QKLDPHIDRY AARTAGMTAS EIRALFAVAS RPEVVSLAGG MPNLAALPLD SLSEQMSELV ARDGLVALQY GSAQGVPALR EQICEVMAME GITAHPDDIV VTVGSQMGLD MVTRLFCDPG DVVIAEGPSY VGALGSFAAY QAQVVHVAMD DDGLVPEALR EALAQAKQEG KRVKLLYTIP NFHNPAGVTL SVERRAEIVE ICAEHDVLIL EDNPYGLLGF DGQTYPSLRS MAPDNVVYLG SFSKTFASGL RVGWVLAPHA VREKLVLAAE SATLCPPTLN QLVVSKYLAT HDWKGQIKTF RENYRERRDA MLSALEQHLP EGCTWTRPEG GFYVWVTVPE GVDTKAMLPR AVTARVAYAS GTGFYADGLG SRQMRLSYCY PTPERIREGV RRLAGVLESE MELMRTFGSV TSRAVSGPQF PGPDTA
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