Gene Svir_39400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_39400 
Symbol 
ID8389261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp4264909 
End bp4265379 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content69% 
IMG OID644977950 
Productsingle-strand binding protein 
Protein accessionYP_003135709 
Protein GI257057877 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.567165 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGGAG ACACCATCAT CACTGTGGTC GGCAACCTCA CGGCCGACCC CGAGTTGCGG 
TTCACGCCTT CGGGCGCCGC TGTCGCGAAC TTCACGGTCG CGTCCACGCC CCGCGTCTTC
GACCGCCAGA CCGGCGAGTG GAAGGACGGC GAGGCGCTGT TCCTGCGCTG CAACATCTGG
CGCCAGGCGG CCGAGAACGT CGCCGAATCC CTGACCAGGG GTGCCAGGGT CATCGTGCAG
GGCCGGCTGA AGCAGCGGTC GTTCGAGACC AAGGAAGGCG AGAAGCGCAC GGTCGTCGAG
CTCGAAGTCG ACGAGATCGG TCCTTCACTG CGCTACGCGA CGGCGAAGGT CAACAAGGTC
AGCCGGGGCA GCGGCGGAAG CGGGTTCGGC GGTGCGCCCG CCGACGACCC GTGGGGTTCG
GCACCTCCCG CGGGCGGCGC GGGCGGTTTC TCCGACGAGC CCCCGTTCTA G
 
Protein sequence
MAGDTIITVV GNLTADPELR FTPSGAAVAN FTVASTPRVF DRQTGEWKDG EALFLRCNIW 
RQAAENVAES LTRGARVIVQ GRLKQRSFET KEGEKRTVVE LEVDEIGPSL RYATAKVNKV
SRGSGGSGFG GAPADDPWGS APPAGGAGGF SDEPPF