Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_39400 |
Symbol | |
ID | 8389261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 4264909 |
End bp | 4265379 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644977950 |
Product | single-strand binding protein |
Protein accession | YP_003135709 |
Protein GI | 257057877 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0629] Single-stranded DNA-binding protein |
TIGRFAM ID | [TIGR00621] single stranded DNA-binding protein (ssb) |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.567165 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGGAG ACACCATCAT CACTGTGGTC GGCAACCTCA CGGCCGACCC CGAGTTGCGG TTCACGCCTT CGGGCGCCGC TGTCGCGAAC TTCACGGTCG CGTCCACGCC CCGCGTCTTC GACCGCCAGA CCGGCGAGTG GAAGGACGGC GAGGCGCTGT TCCTGCGCTG CAACATCTGG CGCCAGGCGG CCGAGAACGT CGCCGAATCC CTGACCAGGG GTGCCAGGGT CATCGTGCAG GGCCGGCTGA AGCAGCGGTC GTTCGAGACC AAGGAAGGCG AGAAGCGCAC GGTCGTCGAG CTCGAAGTCG ACGAGATCGG TCCTTCACTG CGCTACGCGA CGGCGAAGGT CAACAAGGTC AGCCGGGGCA GCGGCGGAAG CGGGTTCGGC GGTGCGCCCG CCGACGACCC GTGGGGTTCG GCACCTCCCG CGGGCGGCGC GGGCGGTTTC TCCGACGAGC CCCCGTTCTA G
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Protein sequence | MAGDTIITVV GNLTADPELR FTPSGAAVAN FTVASTPRVF DRQTGEWKDG EALFLRCNIW RQAAENVAES LTRGARVIVQ GRLKQRSFET KEGEKRTVVE LEVDEIGPSL RYATAKVNKV SRGSGGSGFG GAPADDPWGS APPAGGAGGF SDEPPF
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