Gene Svir_39320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_39320 
Symbol 
ID8389253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp4255742 
End bp4256296 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content64% 
IMG OID644977942 
Producttranscriptional regulator, PadR family 
Protein accessionYP_003135701 
Protein GI257057869 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.700238 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGGAGC TCGCGATCCT CGGGCTTCTG CACGAAGCAC CCATGCACGG GTATGTGCTG 
CGCAAGCGTT TGCACGAAAC GCTCGGCATG TTCCGCACCT TCTCGTACGG CTCCGTCTAC
CCGACTTTGC GGCGGATGCT CAAAGCCGGG TTGATCGTCG AAGAACCGGC TGAGACATCC
ACGGGGTGGA ATCGCCGTGC GAAGCGCGTC TACAAGCTGA CGGCCGAAGG GAAGGAACGC
TTTTCCGAAC TACTGGCCGA CGCCGGTCCG CAGACCTGGG ACGACGAGGG CTTCGGTGTG
CACCTGACCT TCTTCTCCAG GACACCGGCC GATGTGCGGA TGCGGATCCT GGAAGGCAGG
CGGCGCCGGG TCGAGGAGCG TCGTGAAGGT CTACGGGCGG CGTTGGCGAA GGCCGAGGAG
AAGATCGATC GCTACACCCG TGAGCTGCAC CAGCTCGGAC TGGAGGCGAG TGAACGGGAA
GTGCGCTGGC TCAACGAGCT GATCGCACAC GAACAGGCCG AGCAGCGAGG CAGCAGCAAG
GCCGACGTCG ACTGA
 
Protein sequence
MLELAILGLL HEAPMHGYVL RKRLHETLGM FRTFSYGSVY PTLRRMLKAG LIVEEPAETS 
TGWNRRAKRV YKLTAEGKER FSELLADAGP QTWDDEGFGV HLTFFSRTPA DVRMRILEGR
RRRVEERREG LRAALAKAEE KIDRYTRELH QLGLEASERE VRWLNELIAH EQAEQRGSSK
ADVD