Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_39320 |
Symbol | |
ID | 8389253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 4255742 |
End bp | 4256296 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644977942 |
Product | transcriptional regulator, PadR family |
Protein accession | YP_003135701 |
Protein GI | 257057869 |
COG category | [K] Transcription |
COG ID | [COG1695] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.700238 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGGAGC TCGCGATCCT CGGGCTTCTG CACGAAGCAC CCATGCACGG GTATGTGCTG CGCAAGCGTT TGCACGAAAC GCTCGGCATG TTCCGCACCT TCTCGTACGG CTCCGTCTAC CCGACTTTGC GGCGGATGCT CAAAGCCGGG TTGATCGTCG AAGAACCGGC TGAGACATCC ACGGGGTGGA ATCGCCGTGC GAAGCGCGTC TACAAGCTGA CGGCCGAAGG GAAGGAACGC TTTTCCGAAC TACTGGCCGA CGCCGGTCCG CAGACCTGGG ACGACGAGGG CTTCGGTGTG CACCTGACCT TCTTCTCCAG GACACCGGCC GATGTGCGGA TGCGGATCCT GGAAGGCAGG CGGCGCCGGG TCGAGGAGCG TCGTGAAGGT CTACGGGCGG CGTTGGCGAA GGCCGAGGAG AAGATCGATC GCTACACCCG TGAGCTGCAC CAGCTCGGAC TGGAGGCGAG TGAACGGGAA GTGCGCTGGC TCAACGAGCT GATCGCACAC GAACAGGCCG AGCAGCGAGG CAGCAGCAAG GCCGACGTCG ACTGA
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Protein sequence | MLELAILGLL HEAPMHGYVL RKRLHETLGM FRTFSYGSVY PTLRRMLKAG LIVEEPAETS TGWNRRAKRV YKLTAEGKER FSELLADAGP QTWDDEGFGV HLTFFSRTPA DVRMRILEGR RRRVEERREG LRAALAKAEE KIDRYTRELH QLGLEASERE VRWLNELIAH EQAEQRGSSK ADVD
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