Gene Svir_39240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_39240 
Symbol 
ID8389245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp4247723 
End bp4248094 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content63% 
IMG OID644977934 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003135693 
Protein GI257057861 
COG category[K] Transcription 
COG ID[COG1725] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCGGCG TGAGGGACGA CGGTCGTCCG CTGTTTCTGC AGATCGCGGA GCAGCTAGAG 
GACTCGATCA TCGACGGCTC GCTACCGGAG GAGAGCAAGG CGCCGTCGAC CAATGAGCTC
GCCGCGTTCC ACCGGATCAA TCCGGCCACG GCCGCGAACG GCATCAACAA GCTCGTGGCC
GACGGCCTGC TCTACAAGAA AAGAGGAGTT GGGATGTTCG TAGCGACCGG GGCGCGTGAG
GCGTTGCTCG AACGTCGCCG CAATGCGTTC GCCGAGAAGT TCATCGCGCC CCTGGTGGTG
GAGGCGCGCA GGCTCGGTAT CGACACCGAG GACCTCAAGA AAATGATCGA CACCTGGGGG
GATGACTCAT GA
 
Protein sequence
MVGVRDDGRP LFLQIAEQLE DSIIDGSLPE ESKAPSTNEL AAFHRINPAT AANGINKLVA 
DGLLYKKRGV GMFVATGARE ALLERRRNAF AEKFIAPLVV EARRLGIDTE DLKKMIDTWG
DDS