| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_39080 |
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| Symbol | |
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| ID | 8389229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 4228782 |
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| End bp | 4230608 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644977918 |
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| Product | phosphoenolpyruvate carboxykinase |
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| Protein accession | YP_003135677 |
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| Protein GI | 257057845 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1274] Phosphoenolpyruvate carboxykinase (GTP) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.377396 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.557231 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCAG TAGCCATCCC CGGTCTTGAC AAGGCACCAA CGACACACAG CGGCGTACTT
TCCTGGGTAC GGGAGGTCGC CGAGCTCACC ACGCCCGACC GAGTCGTGTG GGTGGACGGT
TCTGACGAAG AAGCCGAGCG CATCAATGCC GAGCTCGTCG AGGCAGGCAC GTTCGTGCCG
TTGAAGGCCA AGCCCAACTC GTACTGGGCG GCCTCCGACC CGAGCGACGT CGCTCGCGTG
GAGGAGCGGA CGTTCATCTG CTCGGAGCGC GAGGAGGACG CGGGTCCCAC CAACAACTGG
ATGGACCCGA AGGAAATGAA GGCCACCATG ACCGAGCTCT ACCGGGGCTG CATGCGTGGT
CGCACGATGT ACGTGATCCC GTTCTGCATG GGGCCGCTCG GCGCCGAGGA GCCGAAGCTC
GGCATCGAGA TCACCGACTT CGCGTACGTG GTCGCGTCGA TGCGCGTCAT GACGCGGGTG
GGTAAGGCCG CGCTCGACAA GTTCATCGCC CCCGACGGCA CCGAGCGGGA GTTCGTGCCC
GCGCTGCACT CGGTCGGCAA GCCGCTGGAG CCGGGCGAGA AGGACGTGCC GTGGCCGTGC
AACGACACGA AGTACATCAG CCACTTCCCG GAAACGCGCA CCATCTGGAG CTACGGCTCC
GGCTACGGCG GTAACTCGCT GCTCGGCAAG AAGTGCTACT CGCTGCGCAT CGCCTCGGTG
ATGGCCCGGG ACGAGGGCTG GCTCGCCGAG CACATGCTGA TCCTGAAGCT GATCTCGCCC
GAGAACAAGG CGTACTACAT CGCGGCGGCG TTCCCCAGCG CCTGCGGCAA GACCAACCTG
GCGATGCTGC AACCCACGAT CCCGGGCTGG CGTGCCGAGA CGCTCGGTGA CGACATCGCG
TGGTTGCGTT TCGGTGAGGA CGGCAGGCTG TACGCCATCA ACCCCGAGTT CGGGTTCTTC
GGCGTGGCGC CCGGCACCGA CTACCACACC AACCCCAACG CGATGAAGAC CATCGAGAAG
GGCAACACGG TCTTCACCAA CGTGGCCCTG ACCGATGACG GTGACGTGTG GTGGGAGGGC
ATGGCGGAGA CGCCCGAGCA CCTGACGTCG TGGAAGCGGG AGGACTGGAC GCCCGACTCC
GACGAGCCGG CCGCGCACCC GAACTCGCGG TACTGCACGC CGATGTCGCA GTGCCCGATC
CTCGCTCCCG AATGGGACGA CCCGAAGGGT GTGCCGATCT CGGCGATCCT GTTCGGTGGT
CGCCGTGCGA CCACGGTGCC GCTGGTCAAC GAGGCCCGGG ACTGGCAGCA CGGTGTGTTC
ATGGGCGCCA CGATGTCGTC GGAGAAGACC GCTGCCGCCG CGGGCAAGGT CGGCGAGGTG
CGGCGCGACC CGATGGCGAT GCTGCCGTTC CTCGGCTACC ACGTGGGTGA CTACTTCCAG
CACTGGCTGG AGATCGGCAA GAAGGCCGAC AGCGACAAGC TGCCCAAGAT CTTCTACGTG
AACTGGTTCC GTCGGGGCGA CGACCGGCGG TTCCTGTGGC CGGGCTTCGG CGAGAACTCC
CGCGTGCTGA AGTGGATCGT CGAGCGCATC GAGGGCAAGG CCTCGGCCGT CGAGACCCCG
GTCGGTCTCG TGCCGAAGGC CGAGGACCTC GATCTGGAGG GGCTGAAGGA GCCGCTGGCC
GACATCCAGG CGGCCCTGGA GGTCAACCCC GAGGAGTGGC GCCAGGAGAT CCCGCTCATC
GAGGAGTGGT TCGACAAGAT CGGTCGGGAC AAGGTCCCGG CGGAGCTGCT CGACGAGCTG
GAGCGGATGA AGCAGCGTCT GGGCTGA
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| Protein sequence | MTAVAIPGLD KAPTTHSGVL SWVREVAELT TPDRVVWVDG SDEEAERINA ELVEAGTFVP
LKAKPNSYWA ASDPSDVARV EERTFICSER EEDAGPTNNW MDPKEMKATM TELYRGCMRG
RTMYVIPFCM GPLGAEEPKL GIEITDFAYV VASMRVMTRV GKAALDKFIA PDGTEREFVP
ALHSVGKPLE PGEKDVPWPC NDTKYISHFP ETRTIWSYGS GYGGNSLLGK KCYSLRIASV
MARDEGWLAE HMLILKLISP ENKAYYIAAA FPSACGKTNL AMLQPTIPGW RAETLGDDIA
WLRFGEDGRL YAINPEFGFF GVAPGTDYHT NPNAMKTIEK GNTVFTNVAL TDDGDVWWEG
MAETPEHLTS WKREDWTPDS DEPAAHPNSR YCTPMSQCPI LAPEWDDPKG VPISAILFGG
RRATTVPLVN EARDWQHGVF MGATMSSEKT AAAAGKVGEV RRDPMAMLPF LGYHVGDYFQ
HWLEIGKKAD SDKLPKIFYV NWFRRGDDRR FLWPGFGENS RVLKWIVERI EGKASAVETP
VGLVPKAEDL DLEGLKEPLA DIQAALEVNP EEWRQEIPLI EEWFDKIGRD KVPAELLDEL
ERMKQRLG
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