Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_38870 |
Symbol | |
ID | 8389208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 4207659 |
End bp | 4208696 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644977897 |
Product | pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit |
Protein accession | YP_003135656 |
Protein GI | 257057824 |
COG category | [C] Energy production and conversion |
COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.478414 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGCCC CCGTGAAGGC CCCCAACACG AACGCGACGC AGTCGGCGTC GAACGTGCAG AACCTCACCA TCGGCAAGGC CCTCAACGCG GGCCTGCGTG CCGCGATGGA GGCCGACGAC AAGGTCATCG TGCTGGGCGA GGACGTCGGC AAGCTCGGCG GCGTCTTCCG CATCACCGAC GGTCTGCAGA AGGACTTCGG TGAACACCGC GTGCTCGACA CGCCGTTGGC CGAGTCGGGC ATCATCGGCA CCGCGGTCGG GCTGGCCGTG CGCGGCTTCC GACCGGTGTG CGAGATCCAG TTCGACGGGT TCGTCTTCCC CGCCTTCGAC CAGATCGTCA GCCAGTTGGC GAAGCTGCAC TACCGCACGC AGGGCGGACT CAAGGTGCCC GTGGTGGTCC GCATCCCGTT CGGCGGGGGG ATCGGCTCGG TCGAGCACCA CTCGGAATCA CCGGAGTCGC TGTTCGCACA CACCGCGGGT CTCAAGGTCG TGGCGTGTTC GAACCCGGTG GACGCCTACT GGATGATCCA GCAGGCCATC CGGTGCGACG ACCCGGTGGT GTTCTTCGAG CCGAAGCGCT TCTACCACTC GGGGGCGTTG AAGGCGCCGG TGGACCCCTC GGCCACACCC GACCCGCTGT TCGCCTCGCG CGTCGTGCGA CAGGGCACGG CGGCCACCCT GGTGACGTAC GGCCCGTCGG TGCGGGTGTG CCTCGACGCC GCCGAGGCCG CGGCCGAGGA GGGCACGGAG CTGGAGGTCA TCGACCTACG CGCACTGTCG CCGTTGGACC TGGGCCCGGT GTTCGAGTCG GTGCGTCGCA CCGGCCGGCT GATCGCGGTG AGCGAGGCCC CGCCGGAGGC GTCGATCACC TCCGAGATCG CGGCCCGGGT GCAACAGGAG TGCTTCTACT CGCTGGAGGC GCCGGTGCTG CGGGTGACCG GATTCGACAC CCCGTACCCG CCGGCCAAGG CGGAGGAGCA TTTCCTGCCG GACCTCGACC GGGTACTCCA CGCCGTCGAC CGCGCTCTGG ACTGGTGA
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Protein sequence | MAAPVKAPNT NATQSASNVQ NLTIGKALNA GLRAAMEADD KVIVLGEDVG KLGGVFRITD GLQKDFGEHR VLDTPLAESG IIGTAVGLAV RGFRPVCEIQ FDGFVFPAFD QIVSQLAKLH YRTQGGLKVP VVVRIPFGGG IGSVEHHSES PESLFAHTAG LKVVACSNPV DAYWMIQQAI RCDDPVVFFE PKRFYHSGAL KAPVDPSATP DPLFASRVVR QGTAATLVTY GPSVRVCLDA AEAAAEEGTE LEVIDLRALS PLDLGPVFES VRRTGRLIAV SEAPPEASIT SEIAARVQQE CFYSLEAPVL RVTGFDTPYP PAKAEEHFLP DLDRVLHAVD RALDW
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