Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_38820 |
Symbol | |
ID | 8389203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 4202033 |
End bp | 4202788 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644977892 |
Product | amino acid ABC transporter ATP-binding protein |
Protein accession | YP_003135651 |
Protein GI | 257057819 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGATG TGATCGTCGA GGTCTCCGAC CTGCACAAGT CCTTCGGCCA CCTGGAGGTG CTCAAGGGCA TCGACCTCGA AGTACGCCGC GGTGAGGTCG TGTGCATCAT CGGGCCGTCC GGTTCGGGTA AGTCGACGCT GTTGCGGTGC GTGAACCTGT TGGAGGAGCC GAACTCCGGC AAGGTCGTGG TCAACGGATT CGAACTGACC GATCCGGACG TCGACATCGA CCGGGCCCGG CGCACCATCG GCATGGTGTT CCAGAGTTTC AACCTGTTCG GTCATCTGTC CGTGTTGGAC AACCTCACCG TCGCGCAGCG CAAGGTGCTG AAGCGGGACA AGGCCGAGGC CGAACGGATC GCGCTGGACA ACCTCGCCAA GGTGGGACTG TCGGACAAGG CCGGGGCCAT GCCCGCGCAG CTGTCCGGTG GGCAGCAACA GCGGGTGGCC ATCGCCAGGG CGTTGTCCAT GAACCCCGCC GTGATGCTGT TCGACGAGCC GACGTCGGCG CTCGACCCCG AACTCGTGGG CGACGTCCTC GCGGTGATGC GGCAACTCGC CGACGAGGGC ATGACGATGC TCGTGGTCAC CCACGAGATG CAGTTCGCCC GCGAGGTCGC CGACACGGTG CTGTTCATGG ACGGCGGAGT GGTGGTCGAG CAGGGATCGC CGAACCAGGT GATCGGCAAC CCCCAGCAGC AACGCACCCG GACGTTCCTG GCCCGTGTGC TCAACCCCAT CGACGCCGAC GGATAA
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Protein sequence | MSDVIVEVSD LHKSFGHLEV LKGIDLEVRR GEVVCIIGPS GSGKSTLLRC VNLLEEPNSG KVVVNGFELT DPDVDIDRAR RTIGMVFQSF NLFGHLSVLD NLTVAQRKVL KRDKAEAERI ALDNLAKVGL SDKAGAMPAQ LSGGQQQRVA IARALSMNPA VMLFDEPTSA LDPELVGDVL AVMRQLADEG MTMLVVTHEM QFAREVADTV LFMDGGVVVE QGSPNQVIGN PQQQRTRTFL ARVLNPIDAD G
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