Gene Svir_38620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_38620 
Symbol 
ID8389183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp4180904 
End bp4181464 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content68% 
IMG OID644977873 
Producthypothetical protein 
Protein accessionYP_003135633 
Protein GI257057801 
COG category[S] Function unknown 
COG ID[COG3226] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGACAAC GTGTCGACGG GCGTAAGGCC AGGGGGGAGA AACGCCGCCA GGAGATCATC 
GAGGCCACGT TGCGGGTCAT CGAACGTGAC GGTGTCGCGG GTGTCACCCA CCGGACGGTG
GCCAAGGAGG CCGGTGTCCC GACCACGTCG ACCACGTACC ACTTCTCCTC ACTCGACGAC
CTGCTGATCG CCACGCTCAT CAGTTGCGCC CGCGACATGG CCACCGAGGT CTACTGGATG
ATCGACAGGG CGCGGTCGCG CGGCAGCAGG GGGGCCGACG AGGTCGCCAA CCTGCTCGCC
GAGGCGATCG GGCCGCGCCG GGGGCGTACG ATGGCCGAGT ACGAGCTGTA CCTGCTGGCG
GCGCGCCGAC CCGAGCTGCG TCCGGCCGCG CGACGCTGGC TCGATGTGTT GACCTCGATG
GTGCGGCACG ACGACGAGGT GGCGTTCCGC GTGTTCCTCG CGGGTATCGA CGGACTGCTC
ATCCAGGGGC TCATCGACGA CGAACCACCC ACCGCCGAGG AGCTGCGGCC CGTGGTGGAC
TACCTGCTCA AACCGCGCTG A
 
Protein sequence
MRQRVDGRKA RGEKRRQEII EATLRVIERD GVAGVTHRTV AKEAGVPTTS TTYHFSSLDD 
LLIATLISCA RDMATEVYWM IDRARSRGSR GADEVANLLA EAIGPRRGRT MAEYELYLLA
ARRPELRPAA RRWLDVLTSM VRHDDEVAFR VFLAGIDGLL IQGLIDDEPP TAEELRPVVD
YLLKPR