| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_38250 |
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| Symbol | |
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| ID | 8389146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 4145253 |
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| End bp | 4146095 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644977836 |
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| Product | flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase |
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| Protein accession | YP_003135596 |
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| Protein GI | 257057764 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR03620] probable F420-dependent oxidoreductase, MSMEG_4141 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.201502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGTAG ACCTCGGCTC GATCGGTGTC TGGCGTCCGG CGTTCCAGCT CAACGCCGAC
CTCGCGTACG AAGTGGAGAG ACTCGGCTAC GGCGCCATCT GGGTCGGTGG CTCCCCGTCG
GAGGATCTGG GGATCGTCGA GACCCTGCTC GACGCGACCG AGCGCATCGC CGTGGCCACG
GGCGTCGTCA ACATGTGGCA AGCCGACCCG GAGGCGCTCG CCCGTTCCTA CCACCGGATC
GAGGCCAAAC ACCCCGGCCG TTTCCTGTTG GGTGTGGGTG TCGGACACCG TGAGGCCACC
CAGGAGTACC GGAAGCCCTA CGACAAGATC GTGTCCTACC TGGACGCATT GGCCGCGGCG
GGGGTGCCGG GTTCGGCCAC CGTACTGGCC GCGCTCGGTC CGAAGGTGCT CCGGTTGTCG
GCCGAACGCA CCGCCGGGGC GCATCCGTAC CTCACCACGC CCGAACACAC CCGTCGGGCT
CGCGAGATCC TGGGCGACGG TGTCCTCCTC GCGCCGGAAC AGAAGGTGGT CCTCGACCCC
GATCCCGAAC GGGCCCGGCG GAAAGCCCGT CCCGTGGTCT CCGGCTACCT CGGTCTCGCC
AACTACGCCA ACAACCTCCG CAGACTCGGT TGGACCGATG CCGACCTCGC CGACGGTGGC
AGCGACGCGC TCGTCGACGC GCTCGCCGTA CACGGTGACG CCGACACCGT CGTGCGAAAT
GTCCGGGCCC ACCTCGACGC GGGAGCCGAT CACGTGTGCG TCCAGGTGTT GCCCATGGAC
GTCGACCCTC TCCCGTCCTA CCGGGCGATC GCCGAAGCTG TGGGGCTGAG CACGGCGGTG
TGA
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| Protein sequence | MTVDLGSIGV WRPAFQLNAD LAYEVERLGY GAIWVGGSPS EDLGIVETLL DATERIAVAT
GVVNMWQADP EALARSYHRI EAKHPGRFLL GVGVGHREAT QEYRKPYDKI VSYLDALAAA
GVPGSATVLA ALGPKVLRLS AERTAGAHPY LTTPEHTRRA REILGDGVLL APEQKVVLDP
DPERARRKAR PVVSGYLGLA NYANNLRRLG WTDADLADGG SDALVDALAV HGDADTVVRN
VRAHLDAGAD HVCVQVLPMD VDPLPSYRAI AEAVGLSTAV
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