| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_37880 |
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| Symbol | |
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| ID | 8389109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 4108425 |
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| End bp | 4109963 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644977799 |
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| Product | amidophosphoribosyltransferase |
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| Protein accession | YP_003135559 |
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| Protein GI | 257057727 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
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| TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.458178 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAGCAGC TCGAGGCGGA TCAGCTTGAG TCGGAACCTC GAGAAGAATG TGGCGTCTTC
GGCGTCTGGG CGCCGGGCGA GGACGTCGCC AAACTGACGT ACTACGGTCT GTACGCCCTC
CAGCACCGCG GTCAGGAAGC GGCCGGTATC TCGGTGTCGG ACGGGAAACG TATCGTCGTC
TTCAAGGATC TCGGCCTGGT CAGCCAGGTT TTCGACGAAC AGGTGCTGTC GTCGCTTCAG
GGGCACGTCG CCGTGGGGCA CTGCCGTTAC TCCACCAGTG GGGGCGGTAC CTGGGAGAAC
GCCCAACCGG TGTTTCGCAC GACGAAGGCC GACACCGGGC TGGCCCTCGG TCACAACGGC
AATCTCGTCA ACACCCGCGC GCTGTACGAA CGCGCCCGCG AACTGGGCAT CGCCGACCGG
AACGGTGCCA CCACCGACTC CGACCTGTTG TGCGGACTGT TGGCCCACGC CGCCGCCGAC
AAGGGCATCG AAGGTGCGGC CATGGAACTG TTGCCGACCG TGCGCGGTGC GTTCTGCCTG
GTGTTCGCCG ACGAGAACAC GCTGTACGCG GCACGCGACC CCCACGGCAT CCGGCCGCTG
GTGCTCGGGC GGTTGGAACG CGGCTGGGTG GTCGCCAGCG AGACGGCCGC CTTGGACATC
GTCGGCGCCT CGTTCGTGCG CGAGGTGGAA CCCGGCGAAC TCATCGCGAT CGACTCCGGC
GGCCTGCGGT CCAGCCGATT CGGCAATCCC GAGCCCAAAG GGTGCGTGTT CGAGTACGTC
TACCTGGCGA GGCCGGACAC CACCATCGCG GGTCGTAGCG TGCACGCCAC GCGCGTCGAG
ATCGGCCGCC GACTGGCCCA GGAGCATCCG GCCGAAGCGG ACCTGGTGAT CCCCGTCCCC
GAGTCGGGGA CCCCCGCCGC CATCGGCTAC GCGCAGGCCT CCGGCATCCC GTACGGATCG
GGGCTCGTCA AGAACAGCTA TGTCGGACGC ACGTTCATCC AACCGTCACA GACCATTCGA
CAGCTCGGCA TCCGACTGAA GCTCAACCCC TTGCGGGAGG TCATCCGGGG CAAGCGACTG
GTCGTGGTGG ACGACTCCAT CGTGCGCGGC AACACCCAAC GCGCGCTCGT GCGGATGTTG
CGGGAGTCCG GGGCGGTGGA GGTGCACGTC CGGATCGCCT CCCCGCCGGT GCGGTGGCCG
TGTTTCTACG GCATCGACTT CGCCGCCAAG GCCGAACTGG TGGCGAGCGG TGCCGATCTC
GACGGCGTTC GCCGCTCGAT CGGTGCGGAT TCGTTGGGAT ATGTGTCACT GGACAGCCTG
GTCGCGGCGT CCGACCAGCC CGCGTCGCGA CTGTGCACGG CCTGCTTCGA CGGGAACTAC
CCGATCCCGC TTCCCGACGA AGCGCTGATC GGCAAACATG TCCTGGAAAA CCTCGGTGCG
ACCGAGGACG CGAATCCCGC TGAGAACGGT GAGAAACCGT CTCGATTGCC CAACGCGTCC
CCGGGGTACG GTGCCGAGGG CGCTGTTCGG CGTCCCTAA
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| Protein sequence | MEQLEADQLE SEPREECGVF GVWAPGEDVA KLTYYGLYAL QHRGQEAAGI SVSDGKRIVV
FKDLGLVSQV FDEQVLSSLQ GHVAVGHCRY STSGGGTWEN AQPVFRTTKA DTGLALGHNG
NLVNTRALYE RARELGIADR NGATTDSDLL CGLLAHAAAD KGIEGAAMEL LPTVRGAFCL
VFADENTLYA ARDPHGIRPL VLGRLERGWV VASETAALDI VGASFVREVE PGELIAIDSG
GLRSSRFGNP EPKGCVFEYV YLARPDTTIA GRSVHATRVE IGRRLAQEHP AEADLVIPVP
ESGTPAAIGY AQASGIPYGS GLVKNSYVGR TFIQPSQTIR QLGIRLKLNP LREVIRGKRL
VVVDDSIVRG NTQRALVRML RESGAVEVHV RIASPPVRWP CFYGIDFAAK AELVASGADL
DGVRRSIGAD SLGYVSLDSL VAASDQPASR LCTACFDGNY PIPLPDEALI GKHVLENLGA
TEDANPAENG EKPSRLPNAS PGYGAEGAVR RP
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