| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_37640 |
|---|
| Symbol | |
|---|
| ID | 8389085 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 4087454 |
|---|
| End bp | 4088548 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644977775 |
|---|
| Product | phosphate ABC transporter membrane protein |
|---|
| Protein accession | YP_003135535 |
|---|
| Protein GI | 257057703 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0581] ABC-type phosphate transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00974] phosphate ABC transporter, permease protein PstA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.124306 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAGTC CGACGAGTAC TCCCGACACG GGAGACACCG ACCTGCACAC ACCGCTGTCC
GGTGTACCGC TCACACATGG GCAGCTACCG AAGCACGCCT CGTGGATCGT GTTGGTCGTC
GCGGCACTGG TCGGTCTCGG CCTGTGGTGG CTCGCCGATT GGAACATCGC GGGCGCGACC
ATCCTCGCCG CGATCTGCTA CACCGTCGTG CTCTACACGT GGTCCCGCTT CGTCGAGGGG
CCGAGGAAAG CCAAGGACCG GTTGGTCACG ACCCTGGTGA CAGGCGCGTT CCTGCTCGCC
CTGCTGCCGT TGATCTCGGT CGTGGTCACG GTGGTGTCCA AGGGCCTGGC CCGGTTCGAC
GCCGAGTTCT TCACCTACTC GATGCGAGGT GTGCTCGGTG AGGGCGGTGG TGTCTACCAC
GCCATCACGG GCACGCTCAT CATCACCGGA CTCGCGACGG CCATCTCGGT GCCGGTGGGC
ATGTTGACCG CCATCTACCT GGTGGAGTAC GGCCGGGGCA AACTCGCCAA GGCCATCACC
TTCTTCGTCG ACGTCATGAC CGGTATCCCC TCGATCGTCG CCGGTCTGTT CGCCTACTCC
CTTTTCGCGT TGCTGTTCGA CAACCCCGGC ATCCGCATGG GGATGATGGG CGCCATCGCG
TTGAGCGTGC TGATGACCCC CGTGGTGGTG CGGTCGACGG AGGAGATGCT GAAGCTCGTC
CCCAACGAGT TGCGGGAGGC GTCGTACGCG CTCGGGGTCC CCAAATGGCG GACTATCCTC
AAGGTGGTGC TGCCGACCGC ACTGGCCGGT ATCGCCACGG GTGTCACCCT CGCCATCGCC
AGGGTCATCG GCGAAACCGC ACCTTTGCTG GTGACGGCGG GTATCACCAC GGGCGACAAC
TTCGATCCGT TCGACGACCG CATGGCCACC TTGCCGGTCT TCGCGTACTA CCAGTACGTC
GCCCCTGGTA CCCCACCCGA GCCGGCACTC GATCGGGCCT GGGCGGCCGC GCTGCTGCTC
ATCATCATCG TGATGGTGCT CAACCTGATC GCCCGGCTCA TCTCCCGCAT GTTCGCCCCC
AAGACCCGCG GCTAG
|
|---|
| Protein sequence | MPSPTSTPDT GDTDLHTPLS GVPLTHGQLP KHASWIVLVV AALVGLGLWW LADWNIAGAT
ILAAICYTVV LYTWSRFVEG PRKAKDRLVT TLVTGAFLLA LLPLISVVVT VVSKGLARFD
AEFFTYSMRG VLGEGGGVYH AITGTLIITG LATAISVPVG MLTAIYLVEY GRGKLAKAIT
FFVDVMTGIP SIVAGLFAYS LFALLFDNPG IRMGMMGAIA LSVLMTPVVV RSTEEMLKLV
PNELREASYA LGVPKWRTIL KVVLPTALAG IATGVTLAIA RVIGETAPLL VTAGITTGDN
FDPFDDRMAT LPVFAYYQYV APGTPPEPAL DRAWAAALLL IIIVMVLNLI ARLISRMFAP
KTRG
|
|---|
| |