| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_37290 |
|---|
| Symbol | |
|---|
| ID | 8389050 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 4049294 |
|---|
| End bp | 4050106 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644977741 |
|---|
| Product | protein of unknown function (DUF1963) |
|---|
| Protein accession | YP_003135502 |
|---|
| Protein GI | 257057670 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3878] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.132854 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGGCC GGGTATTCGA CATCACGACG GTCGACCGCG TCACCGGACT GATTCGCCCG
GGACTGCGCC TGGTGACCGG TGAGGACATC GCCGTGGGTC GCTCCCACCT CGGAGGACTG
CCGCGGCTGG ACGGTACGGC GCCGTGGCCC ACCCACTTCG AGACCCCCCT CGACCTGTTG
GCCGTCATCG ACGTCGCCGA ACTCGGACCT TGCGACCTTC CCGGGCTGCC CGCCGGCACC
CGTTTCCCCA ACTTCTTCTT CCTCGCCGAC CGACCGGAGC TGCTGTGGAC GAGCGACGAG
CCCGCCTCCA CCTGGCGGGT CGTGCCCGCC GGTCCTGATG CGAAGGAACG CACGGCCCCC
GTCGAAAGAC TCGTCCGGCC GGCGCGACCA GTGGGTTTCG TACCGGTCCT GACGTTGCCG
ACGTGGGAGG ACGAGGTGGT GGCGCGAACC CTCGGTGTCG CCGAGGGCCC GTATCCGCCG
AGTCCCCGGT ACCACCTGAT CGAACGCTAC TCGGCCGTCA CCGCGGCGTG GAACGAACTG
GTGCGGGACC ACCTGGGCGC CGTCGAGAAC CGGATCGGTG GTTGGCCGGC CCCACTACAA
GCCCCGGTCT TCCACCGCGC GGAAAGGGAT TCCGCGTCAC ACCGCTCGTC CCCGGCGGAC
GGCGGCCCGT GGCGGCTGCT GTTGCAACTC GACACGAACG ACGATTCGGG TTGGAGCTGG
GGCGACGGCG GACGACTGTA CTTCGTGATC ACCGAATCCC GACTGCGGGC AGGAGAGCTC
ACCGCCGCCT GGCTGGAGCT GCAGAGTTCC TGA
|
|---|
| Protein sequence | MFGRVFDITT VDRVTGLIRP GLRLVTGEDI AVGRSHLGGL PRLDGTAPWP THFETPLDLL
AVIDVAELGP CDLPGLPAGT RFPNFFFLAD RPELLWTSDE PASTWRVVPA GPDAKERTAP
VERLVRPARP VGFVPVLTLP TWEDEVVART LGVAEGPYPP SPRYHLIERY SAVTAAWNEL
VRDHLGAVEN RIGGWPAPLQ APVFHRAERD SASHRSSPAD GGPWRLLLQL DTNDDSGWSW
GDGGRLYFVI TESRLRAGEL TAAWLELQSS
|
|---|
| |