Gene Svir_37190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_37190 
Symbol 
ID8389040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp4039646 
End bp4040932 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content69% 
IMG OID644977731 
Productpredicted phosphohydrolase 
Protein accessionYP_003135492 
Protein GI257057660 
COG category[R] General function prediction only 
COG ID[COG1408] Predicted phosphohydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0869389 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTTCG CCGTCCTCAG CCTCCTGATC GCGGTCGTCC ACCTGTACCT GTGGAAGCGG 
CTGGTAGCCG ACACGACGCC GCCGAGGAGC CGTTCCCGCC GGGTGGGCAC GGCCGTGCTC
GTGACCTTCC TGATGCTGAT GATGGCGGCG TTGTCGCTGG GGACGAGTGT TCCACCGGAC
ATCGCCCGAT GGTTCGCCTG GCCGGGGTAC CTGTGGTTGG CGGTGTTCTT CTACCTGCTG
CTGACCCTGC TCGTGTTGGA ACTGCCCCGG CTGGTGCTGC GGCGCTGGCT GCGTGGCGGG
CGGGACGAAC CCGGGGAGAG CGGGACGAGT CGGAGGCGGC GGGGAGCCGG AAAGCGCGCG
GGGCACGGTG CCTGTGTGGG CGAAACGAGC GACGAACCGA GCGGCGGTAC CCGACTGGAC
TCGCCCGCCG CGGCGAACAT CGGTTCCGGC ACCGAGATCT CCCGCCGAAC GGCGTTGGCC
CGTGGTTCGG CGCTGGTCGC GAGCGCGGTG GCGGTGGGCT TGACCGGCTA CGGCGTGAGC
GTCGCCATGG GACCGCCGAC CGTCACCCGG GTACCGATCA CCCTGCGCCG GCTGGACCCC
CGCGTCGAGG GCTGCCGCAT CGCCCTCATC AGCGACGTAC ATCTGGGACC GATCATCGGC
AGATCGTTCA CCCAACGCAT CGTCGACCTG GTCAACGTCG AACGGGTGGA CGCCGTGGCC
ATCGCGGGTG ACTTGGTGGA CGGCGACGTC GCCGATCTGG CCGACGCGGC CGCCCCGCTC
GCAAAACTGC GCAGCACCCA CGGCACCTAC TACGTCACCG GTAACCACGA GTACTACTCC
GGGTACCGAC AGTGGATCGA GTACCTGCCC ACCCTGGGGG TCCGCCCCCT GCGCAACGAA
CGGGTGGAGA TCCACCACAA CGGCGGCGTG TTCGACCTCG CGGGCATCAA CGACGCCACC
GGGTACCAAT GGCAGGACCC GGGAGACGTC GAACAGGCCC TCGCCGGTCG TGACCCTGCA
CGAGCCGTGG TGCTGCTCGC CCACCAGCCC GTGGACTTCA CCCAGGCCGT CGACCACGAC
GTGGACCTGC TGTTGGCCGG ACACACGCAC GGTGGTCAGC TGACGCCCTT CGAAGTGGCC
GTGCAGGTGC AGCAGGGCGC GGTGGCCGGC CTCTACCAAC GCGGGAACAC GAAGATGTAC
GTCACGCGCG GTGCGGGCTT CTGGGGCCCA CCCGTGCGGG TGGGCGCTCC CCCGGACATC
ACCGTCGTGG AACTACGTCG CGGCTGA
 
Protein sequence
MFFAVLSLLI AVVHLYLWKR LVADTTPPRS RSRRVGTAVL VTFLMLMMAA LSLGTSVPPD 
IARWFAWPGY LWLAVFFYLL LTLLVLELPR LVLRRWLRGG RDEPGESGTS RRRRGAGKRA
GHGACVGETS DEPSGGTRLD SPAAANIGSG TEISRRTALA RGSALVASAV AVGLTGYGVS
VAMGPPTVTR VPITLRRLDP RVEGCRIALI SDVHLGPIIG RSFTQRIVDL VNVERVDAVA
IAGDLVDGDV ADLADAAAPL AKLRSTHGTY YVTGNHEYYS GYRQWIEYLP TLGVRPLRNE
RVEIHHNGGV FDLAGINDAT GYQWQDPGDV EQALAGRDPA RAVVLLAHQP VDFTQAVDHD
VDLLLAGHTH GGQLTPFEVA VQVQQGAVAG LYQRGNTKMY VTRGAGFWGP PVRVGAPPDI
TVVELRRG