| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_37160 |
|---|
| Symbol | |
|---|
| ID | 8389037 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 4037135 |
|---|
| End bp | 4037338 |
|---|
| Gene Length | 204 bp |
|---|
| Protein Length | 67 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644977728 |
|---|
| Product | cold-shock DNA-binding protein family |
|---|
| Protein accession | YP_003135489 |
|---|
| Protein GI | 257057657 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1278] Cold shock proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.0943216 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGCAAG GCACTGTGAA GTGGTTCAAC GCCGAGAAGG GCTTCGGCTT CATCGCCCAG
GACGGTGGCG AGGGCGACGT GTTCGTCCAC TACTCGGAGA TCGAAGGCCG TGGCTTCCGC
ACGCTGGAGG AGAACCAGCG TGTCGAGTTC GAGGTGGGAC AGGGCCAGAA GGGCCCGCAG
GCGCAGAGGG TTCGTGCTCT CTGA
|
|---|
| Protein sequence | MAQGTVKWFN AEKGFGFIAQ DGGEGDVFVH YSEIEGRGFR TLEENQRVEF EVGQGQKGPQ
AQRVRAL
|
|---|
| |