Gene Svir_36640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_36640 
Symbol 
ID8388985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3983975 
End bp3984226 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content63% 
IMG OID644977676 
Productprotein of unknown function (DUF397) 
Protein accessionYP_003135442 
Protein GI257057610 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0015395 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.323981 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGATT ATGCCGAGAG TTCGGAGTAC GACCCGACCA CGGCCGTGGG CATGTTCGCC 
CCCGGCAACT GGCGTAAGTC CTTCGCCAGT GAACCCAACG GAGGCAACTG TGTCGAGGTG
AACATCGCCG AGGACAGAGT CGGTGTTCGT GACACAAAGC TGCCCGACAG CCCGGTCTTC
GTGTTCTGGC CCTCGGAGTG GGATGCCTTC GTCAAGGCCG TGAAGGCCGG CCAGTTCGAC
CTGCCGCGGT GA
 
Protein sequence
MVDYAESSEY DPTTAVGMFA PGNWRKSFAS EPNGGNCVEV NIAEDRVGVR DTKLPDSPVF 
VFWPSEWDAF VKAVKAGQFD LPR