| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_36150 |
|---|
| Symbol | |
|---|
| ID | 8388936 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 3939183 |
|---|
| End bp | 3939959 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644977630 |
|---|
| Product | Zn-dependent hydrolase, glyoxylase |
|---|
| Protein accession | YP_003135397 |
|---|
| Protein GI | 257057565 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCATC CCGCTTACGG GGTGCTTCGG CCGGTGTCTC CCATCGCGTC GGTGTTGTTG
CAGAACAACC CGTCGACGAT GACGTTGGAG GGCACCAATA CCTGGGTGTT GCAGGCCCCC
GGGGCAGCGG GGCGGATCGT CGTGGACCCC GGGCATGCTC TCGACGACCA TCTCGAGACG
CTCGCGGGAC TGTCCGGTAT CGAGTTAATC CTGCTCACCC ACCGGCACCC GGATCACGTG
GAGGCAGCAC CGTCGCTCGC CGAACGCGTG GACGCGCCGG TGCGGGCGTT CGACGCTTCC
CTGTGCCGGG GAGGTGACCC GCTCGTCGAC GGCGACGTGG TGCGGGCAGC GGGATTGACG
TTGCAGGTCG TCCACACCCC GGGGCACACC GACGACTCCA TCGTGCTGCA CCTGGACCAC
GGCGGGCGGA CGTACGCGGT CACCGGTGAC ACGGTGTTGG GGCGGGGCAC CACCGTGTTG
TCCGACCTGG GTGGTTACCT CGACTCGCTG CGCAAACTGG GTGAGTTGCC GCCCGGCACG
CTCGGGTTGC CCGGCCACGG TCCCGAGCTG TCGGATCTGG TGAGCACCGC GGCCGAATAC
CTACGCCACC GTGAACAACG GCTGGACCAA GTGCGCCAGG CGTTGCGGAA GCTCGGCGAC
GACGCCACGG CTCGCCAGGT GGTGGAACTC GTCTACGCCG ACGTCGATCC GGCGCTGTGG
GCGCCCGCAG AGGAGAGCGT CCGGGCTCAG CTGGAGTACC TGCGTTCGCG CGGCTGA
|
|---|
| Protein sequence | MNHPAYGVLR PVSPIASVLL QNNPSTMTLE GTNTWVLQAP GAAGRIVVDP GHALDDHLET
LAGLSGIELI LLTHRHPDHV EAAPSLAERV DAPVRAFDAS LCRGGDPLVD GDVVRAAGLT
LQVVHTPGHT DDSIVLHLDH GGRTYAVTGD TVLGRGTTVL SDLGGYLDSL RKLGELPPGT
LGLPGHGPEL SDLVSTAAEY LRHREQRLDQ VRQALRKLGD DATARQVVEL VYADVDPALW
APAEESVRAQ LEYLRSRG
|
|---|
| |