| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_36140 |
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| Symbol | |
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| ID | 8388935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 3937916 |
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| End bp | 3939175 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644977629 |
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| Product | arabinose efflux permease family protein |
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| Protein accession | YP_003135396 |
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| Protein GI | 257057564 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCAACT TCGTCGAGTC TGGTCGCACC ACCCTCTCCG ACTACCGCGT CGCGCTGACC
ACACCCGCTG CTCGGAGGCC GCTCATCGCC TCCTTGCTGG CCCGGCTCCC GATCGCCATG
ATCGGAATCT CCGAGCTGCT CTACGTACAG CACCGGACCG GCACGTACGC GGTGGCCGGA
CTGGTGTCGG CGGGCACGCT GATCGGTGTG GCGATCGGTT CGGTGGTACA GGGGCGACTC
ATCGACCGGT TCGGCCCCAC CCGACCGCTG CTCGTCGTCG TAGGCCTGTT CGCGGCGACG
ATGGCGGGGC TGATAGCGGC CATCGAGAAC CAGACCGCCA CCCCCGTGCT CGTGGCACTC
GCCTGGGGAA TCGGCCTGTT CGAACCCATG TGCGGCTCGG CGTCCCGAGC GTTGTGGCGC
AGACTGCTAC CACCCGGCCC CGCGCTCACC GCCGCGTACT CGTACGAGGC CATCAGCATG
GAGGTCTTCT TCATCCTCGG CCCCGGGTTG GCGGGAGCCC TCATCACCGC TCCCTGGCCG
GGAACCGGCC TGGTCCTCGG CGGAGCGTGC ATGGTGGTGG GCGCGGTGCT GTTCGCACTG
AGCCCGGCCG TGCGAGCCTG GCCACCCGCT CCCAGGACGA ACGCCCCACT GCTCGGTGCG
TTCAGCAGTC CCGGCATGCG CACACTCGCG CTGGCGGCAC TGGGCTTCGG CATGGTCATC
GGCTTCGTCG AGGTCGCCGT ACCCGCCGCG GCCACCAACG CCGGCAACAC CGCCCTGGGC
GGTCTGCTGT TGTCGGTGTG GTCGGTGAGT TCCGTGGCGT TCGGCATCGT CTACAGCCTC
CGCCCCTGGC CGAGGCCGTT GGGCCTGCGC CTTCCCGTGC TGCTCGCGCT GTTCGGCGCC
TGTGTGGCGC TCCTGGCATG GCCGTCGACG TTGTGGGGTC TCGCGGTGGC CATGCTGGCC
TCGGGTGCCC TCATCACCCC GCAGTCCACC GCCCATTCGA TCGTCATCGA AGTGGTGGCC
CCGAAGGGAA CGGCGGCCGA GGCGTTCGGC TGGGTCCTCA CGGCCATCAC ACTCGGCTTG
GCGATCGGAC AGTCGGCCAG CGGTTACCTG GTGGAGCACA GCGGACCAGC GCTCGCGTTC
GGCGTGGCGG CGATCTGCGC GCTCGTACTG GCCGGAGCGG TATGGCTGCG CAGGAACACG
GTCCGGGCCC CCGTCGAGGA CGAACGGTCG ACGGATGCCG CGGACGCCGT CGCGGCGTGA
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| Protein sequence | MSNFVESGRT TLSDYRVALT TPAARRPLIA SLLARLPIAM IGISELLYVQ HRTGTYAVAG
LVSAGTLIGV AIGSVVQGRL IDRFGPTRPL LVVVGLFAAT MAGLIAAIEN QTATPVLVAL
AWGIGLFEPM CGSASRALWR RLLPPGPALT AAYSYEAISM EVFFILGPGL AGALITAPWP
GTGLVLGGAC MVVGAVLFAL SPAVRAWPPA PRTNAPLLGA FSSPGMRTLA LAALGFGMVI
GFVEVAVPAA ATNAGNTALG GLLLSVWSVS SVAFGIVYSL RPWPRPLGLR LPVLLALFGA
CVALLAWPST LWGLAVAMLA SGALITPQST AHSIVIEVVA PKGTAAEAFG WVLTAITLGL
AIGQSASGYL VEHSGPALAF GVAAICALVL AGAVWLRRNT VRAPVEDERS TDAADAVAA
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