| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_36010 |
|---|
| Symbol | |
|---|
| ID | 8388922 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 3925577 |
|---|
| End bp | 3927568 |
|---|
| Gene Length | 1992 bp |
|---|
| Protein Length | 663 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644977616 |
|---|
| Product | acetyl-CoA synthetase |
|---|
| Protein accession | YP_003135383 |
|---|
| Protein GI | 257057551 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
|---|
| TIGRFAM ID | [TIGR02188] acetate--CoA ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.107334 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAAAGC AGTCACCGGC ACTCGACAAC CTGCTGACCG AGAGCCGAAC CTTCCCTCCG
AGCGAGGAGT TCGCGGCGAA GGCCAACGCG ACCGAACAAT GGTACGCCGA CGCGGAGGCC
GATCCGGAGG CGTTCTGGGA GCGCCAGGCC GAACGTCTGC ACTGGCAGAC CAAGTGGTCG
CAAGTGCTGG ACTGGTCGAA CGCCCCGTTC GCCAAGTGGT TCGTGGGCGG CAAGTTGAAC
GTCGCCTACA ACTGTGTCGA CCGGCACGTC GAGAACGGGC ACGGCGACCA GGTGGCGATC
CATTGGGTCG GCGAGCCCGG CGACACCCGG GACATCACCT ACGCCGAACT GCACCGCGAA
GTCTGCAAGG CGGCGAACGC GCTGCTCTCC CTGGGAGTGA CCGCGAACGA TCGGGTGGCC
ATCCAACTGC CGATGATCCC CGAGGCGATC GTGTCGATGC TCGCGTGCGC CCGGATCGGC
GCCCTGCACA GCGTCGTCTT CGGTGGGTTC TCCTCCTCCG CGCTGCGGTC ACGTGTGGAC
GACGCCGAGG CCAAGGTCGT GATCACGTCC GACGGTCAGT ACCGGCGGGG CAAGGCCATG
CCGATGAAGG CGAACGTGGA CGAGGCGTTG GACGGCGCCG ACACGGTGGA GAAGGTCATC
GTGGTGCGGC GCGTGGGTGA CGACCTCGAG GGTGGAGTGC CGTGGACCGA GGGCCGCGAC
GTGTGGTGGC ACGACCTCGT CGACGCGCAG TCCGACGAAC ACGAGCCGGA GGCGTTCGAC
TCCGAACACC CGCTGTTCAT CCTGTACACC TCGGGCACCA CGGGGAAGCC GAAGGGCATC
CTGCACACCT CGGGCGGCTA CCTCACCCAG GTCGCGTACA GCCACCACGT CGTGTTCGAC
CACAAGCCCG GCGAGGACGT GTACTGGTGC ACCGCCGACA TCGGCTGGAT CACCGGGCAC
TCCTACATCG TGTACGGGCC GCTGGCCAAC CGCGCCACGC AGGTGGTGTA CGAGGGCACG
CCCAACACGC CGCACGAGGG CAGGCACTGG GAGATCGTGC AGAACTACAA GGTCACGATC
TACTACACCG CCCCCACTTT GATCCGCACG TTCATGAAGT GGGGCAGCGA CATCCCCGCC
AAGTACGACC TGTCGTCACT GCGGTTGATC GGCTCCGTGG GTGAACCGAT CAACCCCGAG
GCCTGGGTGT GGTACCGGAA GCACATCGGT GGTGACCGCT GCCCCATCGT GGACACGTGG
TGGCAGACCG AGACCGGCGC GATCATGATC TCGCCGCTGC CGGGTGTCAC CCACGCCAAG
CCCGGATCGG CGCAGCGTGC GCTCCCGGGT GTCTCCGCGA AGGTCGTGGA CAACGACGGC
AACGAAGTGC CGAGGAACGG CGGCGGATAC CTCGTACTCG ACAAACCGTG GCCGGCGATG
CTGCGCGGTG TCTGGGGCGA CGAACAGCGC TACCGGGACA CCTACTGGGC GCAATACGCC
GAGCAGGGCT ACTACTTCGC CGGTGACGGC GCCAAGTACG ACGCCGATGG CGACATCTGG
CTGCTCGGCC GGGTGGACGA CGTGATGAAC GTGTCGGGGC ACCGCATCTC GACCACCGAG
GTGGAATCGG CGCTGGTGTC GCATCCGACG GTGGCCGAAG CCGCGGTCGT GGGCGCCACC
GACCCGACCA CCGGGCAGGG CATCGTCGCG TTCGTCATCC TGCGTGGCGG TGTCGCCGAG
GACGAGGCCG GTGGGGAGAA GGCCATTCAG GAGCTGCGTG ACCACGTGGC GAAGGAGATC
GGTCCCATCG CCAAGCCACG GCAGATCATG GTCGTACCCG AGTTGCCCAA GACCAGGTCG
GGGAAGATCA TGCGGCGGCT GTTGCGCGAC GTCGCCGAGA ACCGTGAGAT CGGTGACGTC
ACCACCCTGG CGGACAGCTC CGTCATGGAC CTGATCTCGA AGGGGATGAA GTCCCGCTCC
GGCGACGAGT GA
|
|---|
| Protein sequence | MTKQSPALDN LLTESRTFPP SEEFAAKANA TEQWYADAEA DPEAFWERQA ERLHWQTKWS
QVLDWSNAPF AKWFVGGKLN VAYNCVDRHV ENGHGDQVAI HWVGEPGDTR DITYAELHRE
VCKAANALLS LGVTANDRVA IQLPMIPEAI VSMLACARIG ALHSVVFGGF SSSALRSRVD
DAEAKVVITS DGQYRRGKAM PMKANVDEAL DGADTVEKVI VVRRVGDDLE GGVPWTEGRD
VWWHDLVDAQ SDEHEPEAFD SEHPLFILYT SGTTGKPKGI LHTSGGYLTQ VAYSHHVVFD
HKPGEDVYWC TADIGWITGH SYIVYGPLAN RATQVVYEGT PNTPHEGRHW EIVQNYKVTI
YYTAPTLIRT FMKWGSDIPA KYDLSSLRLI GSVGEPINPE AWVWYRKHIG GDRCPIVDTW
WQTETGAIMI SPLPGVTHAK PGSAQRALPG VSAKVVDNDG NEVPRNGGGY LVLDKPWPAM
LRGVWGDEQR YRDTYWAQYA EQGYYFAGDG AKYDADGDIW LLGRVDDVMN VSGHRISTTE
VESALVSHPT VAEAAVVGAT DPTTGQGIVA FVILRGGVAE DEAGGEKAIQ ELRDHVAKEI
GPIAKPRQIM VVPELPKTRS GKIMRRLLRD VAENREIGDV TTLADSSVMD LISKGMKSRS
GDE
|
|---|
| |