| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_35930 |
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| Symbol | |
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| ID | 8388914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3914487 |
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| End bp | 3915581 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644977608 |
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| Product | hypothetical protein |
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| Protein accession | YP_003135375 |
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| Protein GI | 257057543 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4963] Flp pilus assembly protein, ATPase CpaE |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.184188 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGGGA CGGAGGCCAC AGCGGCGACG GCGGTGGCGG CGGTCTCCGA CGTCGACGAG
CGACCGCTCG CGCTCATGAC CGACGACACC GTCCGCGAAC ACGTCGTTCG ACTCGCCGCG
GCCGTGGGGT GCGAACTCCA CCACGTCACC GATTCCGCGG CAGCACGTCC GCGTTGGTCG
GACGCGCCAT TGGTGCTGAT CGATCACGTC CCCGACGTGA TCGACGTCCC GCGCAGGTCC
GGGGTGTTGC TGGTGCGTAC GGACACCCCC ACTCCGGAGC AGTGGAAGGC GGCCGTCGCG
CTGGGGGTGG ACGGTGTGGC CGTCCTTCCC GCAGATGAGG ACGTCGTCGT CACCGCGCTC
GCCGATGTCG CCGAGAAACC GAGTGACCGT GAGGGGCGAG TGCTCGCGGT GATCGGTGGC
CGGGGAGGGG CGGGAGCGTC GGTGCTGGCG GCGAGCGTGG GGCTGGCCGC GGCGCGTTCC
GGTGGGGCGG CGCTGTTGGT GGACTGCGAT CCGCTCGGTG GGGGTTTGGA TCTGGTGTTG
GGCGCCGAGG CGGACGAGGG GCTGCGCTGG TCCGATGTGC GGGTGTCCTC GGGAAGGGTG
TCGATGGCTG AGTTGGACGC CGTCCTTCCG TTCCGGCGAC GAGGACGGGG TCGAATGTCG
ATCCTGTCCT GTGACCGGAC GGGGCCGGGT CCGACGGAGG CTGCGTTGGC CGCCGTCGTC
GACGCCGGGC GTAGAGCGGG TCGGACGGTG GTGTGCGATG TGCCCCGACA TCCGAGTCCG
GCTGCCGACG AGGTGCTGCG ACGCGCCGAT CTCGCCGTGC TGGTGGTGCC CGCCGATGTC
CGGGGCTGCG TGTCGGCCGC GCGGGTGCGT CATCGACTGT CCGAGCGCAT CGCCCGGATC
GCCGTGGTGG TCAGGGCCTC CGCGGCGACC AGCCTCAGCG AGGCCGATGT GGTCGAGGCC
GTGGGGGCGC CCGTGCTCGG CTGGCTACGG GACGAGCGGT CCATGGTTCG GGCCATGGAC
CGCGGGAGGT TCGACCCCGG TAGGCGAATC GGCAAGGTCT CCGGAACCGT TTTGTCGGTA
CTCGCCGAAT CCTAG
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| Protein sequence | MIGTEATAAT AVAAVSDVDE RPLALMTDDT VREHVVRLAA AVGCELHHVT DSAAARPRWS
DAPLVLIDHV PDVIDVPRRS GVLLVRTDTP TPEQWKAAVA LGVDGVAVLP ADEDVVVTAL
ADVAEKPSDR EGRVLAVIGG RGGAGASVLA ASVGLAAARS GGAALLVDCD PLGGGLDLVL
GAEADEGLRW SDVRVSSGRV SMAELDAVLP FRRRGRGRMS ILSCDRTGPG PTEAALAAVV
DAGRRAGRTV VCDVPRHPSP AADEVLRRAD LAVLVVPADV RGCVSAARVR HRLSERIARI
AVVVRASAAT SLSEADVVEA VGAPVLGWLR DERSMVRAMD RGRFDPGRRI GKVSGTVLSV
LAES
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