| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_35840 |
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| Symbol | |
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| ID | 8388905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 3907199 |
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| End bp | 3909595 |
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| Gene Length | 2397 bp |
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| Protein Length | 798 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644977599 |
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| Product | helicase family protein with metal-binding cysteine cluster |
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| Protein accession | YP_003135366 |
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| Protein GI | 257057534 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0109244 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0530492 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGACG ACGCGGGCAC TCGGGCACAC CGCCTTCTTC ATCGGACGAC GGCGGGGATC
CCTGAAGACC TCTCCCCCGT CACGCACGTC GCGAATCTGC CCGCGGCGGA GCCACGTCAC
ACCGAATGGC CCGAGTGGGT ACCCGACCGA GTACGAGACG TACTGCGGAA TTCCGGCATC
GACAGACCAT GGGCCCACCA GGCCGAAGCG GCATCACTGG CGTGGGATCG GCATAACGTC
GTCGTGGCCA CGGGCACCGC CTCGGGGAAG TCGCTGACCT ACCAACTACC CGCACTCTCC
ACCTTGGTGA CGGACGGCAA GGCGACCGTC CTCTACCTGT CTCCCACGAA GGCCCTGGCC
ACCGACCAGC TACGTGCTGT GTCCGATATG GACATCGAAG GTGTCCGTCC CGCCACCTAC
GACGGGGACA CCCCACGCGG CGAACGCCCG TGGGTGCGGG ACCACGCCCG ATGGGTCTTC
ACGAACCCCG ACATGCTGCA CCGCGGCGTG TTGCCCGCCC ACCCGCGTTG GGCACGGTTC
TTCCGGGGCC TGACCTACGT CGTCGTCGAC GAGTGCCACG CCTACCGCGG CGTGTTCGGC
TCCCACGTCG CGCTGCTGTT GCGCAGACTG CGACGAATCG CCCGGCACTA CGGGGCCGAG
CCCACGTTCA TCCTCACCTC GGCGACCACG GCCGAGCCCG CCGAATTCGC CACCCGACTG
ATCGGACAGG ACTGCGTCGC CGTCACCGAG GACACCTCAC CTCGGGGTGC CAGGACCGTG
GCGTTGTGGG AACCCCCGCT GTTGCCGGAG TTGACGGGTG AGAACGACGC GCCCGTCCGT
CGTTCCGCGG GAGCGGAGGC GGCCCGCATC CTCGCCGAAC TCGTCATCGA GGGCGCTCGC
ACGTTGGCGT TCGTACGTTC TCGTCGGGGC GCTGAACTGA CGGCCCTCGG TGCGCGTCGC
ATCCTCGCCG AGGTGGCCCC CGAACTCGTC GACAAGGTCG CGGCTTATCG TGCCGGCTAC
CTGCCCGAGG AACGCCGCGA ACTGGAGTCC GCTCTCCTTG AGGGTCGACT GCTGGGTGTC
GCGACCACGA ACGCGCTGGA ACTCGGTGTG GACATCTCCG GTCTGGACGC GGTGGTACTC
GCGGGATATC CGGGGACATT GGCGTCGTTT TGGCAGCAGT CGGGGCGCGC GGGCCGCGCG
GGTGCCGACG CACTCGTCGT GTTCGTGGCC CGGGACGATC CGCTCGACAC CTATCTCGCA
CATCATCCGG AGGCGCTGCT GGAGCGGCCC GTCGAGAGCG CTGTGCTCGA CCCCACCAAC
CCTTACGTGC TGGCTCCCCA CCTGGCGTGC GCGGCCGCGG AGTCGGCGCT CAAGTCCACC
GATCTGGACC TCTTCGGCGC AACCGAGGCG CGCGCCGTCC TGGACGACCT CGTCGCGGAG
AAGGTTCTGC GTCGACGGCC GAGTGGCTGG TACTGGACGG CGCGGGAACA ACCGCACCAC
GAAGTGGACA TCCGGGGGTC CGGGGCGGAG CAGGTCGCGG TGGTGGAGGC CGACACTTCC
CGGTTGCTCG GCACCGTCGA TGCCGTATCG GCGTGCAGCA CGGTTCATCC GGGCGCGGTG
TATCTCCACC GTGGCGAACC GTACGTGGTG GACGAACTGG ACTTGGAGCA CGGTGTCGCC
TTCGTGCACG CCGAGGATCC GGAGTGGAAC ACTTCGGCGC GGGACGTGGT GGACATCGAG
ATCCTGGACG TCGTCAAGCG GCACGTCCAC GACGGTGTGA CCGTGAATCT GGGGCATGTG
GCGGTGACCT CGCGGGTCGT GGGCTATCTG CGCCGACTGC CGTCCGGGGA GGTGTTGGAC
CACATCCCTC TCGACCTGCC TGAGCAGGTG CTGCACACGC GCGCCGTCTG GTACACGATC
AGCGAGGAAC TGTTGTGTGG TCCACGCAGG AGGCCGGGGA TCACCGGTGT GGAACCGGCG
CGTGTCCCCG GCGCCCTGCA TGCCGCCGAG CACGCGGCGA TCGGCCTGCT ACCGCTGTTC
GCGACGTGTG ACCGGTGGGA CATCGGCGGC GTCTCCACCG CGGTGCACGC TGACACCGGG
GAGGCGACGG TGTTCGTGCA CGACGGTCAT CCCGGAGGTG CGGGATTCGC CGATCGCGGT
TTTGCCGCGT TCGTCCCCTG GCTCACCGCT ACGCGGGAGG CCGTGCTCTC CTGCGAGTGC
CCGGCGGGGT GCCCGTCCTG TGTTCAGTCG CCCAAGTGCG GGAACGGCAA CGAACCACTG
GACAAGGCGG GGGCTGTGGC CGTGCTGGAC ATCGTCCTGG CCGCGGTCGG GGCTGCGGCC
GGGCACGGCC ACTTCGACGA TCAGGCCGCC GACGACCAGG TGGACAACTC GCGTTGA
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| Protein sequence | MTDDAGTRAH RLLHRTTAGI PEDLSPVTHV ANLPAAEPRH TEWPEWVPDR VRDVLRNSGI
DRPWAHQAEA ASLAWDRHNV VVATGTASGK SLTYQLPALS TLVTDGKATV LYLSPTKALA
TDQLRAVSDM DIEGVRPATY DGDTPRGERP WVRDHARWVF TNPDMLHRGV LPAHPRWARF
FRGLTYVVVD ECHAYRGVFG SHVALLLRRL RRIARHYGAE PTFILTSATT AEPAEFATRL
IGQDCVAVTE DTSPRGARTV ALWEPPLLPE LTGENDAPVR RSAGAEAARI LAELVIEGAR
TLAFVRSRRG AELTALGARR ILAEVAPELV DKVAAYRAGY LPEERRELES ALLEGRLLGV
ATTNALELGV DISGLDAVVL AGYPGTLASF WQQSGRAGRA GADALVVFVA RDDPLDTYLA
HHPEALLERP VESAVLDPTN PYVLAPHLAC AAAESALKST DLDLFGATEA RAVLDDLVAE
KVLRRRPSGW YWTAREQPHH EVDIRGSGAE QVAVVEADTS RLLGTVDAVS ACSTVHPGAV
YLHRGEPYVV DELDLEHGVA FVHAEDPEWN TSARDVVDIE ILDVVKRHVH DGVTVNLGHV
AVTSRVVGYL RRLPSGEVLD HIPLDLPEQV LHTRAVWYTI SEELLCGPRR RPGITGVEPA
RVPGALHAAE HAAIGLLPLF ATCDRWDIGG VSTAVHADTG EATVFVHDGH PGGAGFADRG
FAAFVPWLTA TREAVLSCEC PAGCPSCVQS PKCGNGNEPL DKAGAVAVLD IVLAAVGAAA
GHGHFDDQAA DDQVDNSR
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