Gene Svir_35640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_35640 
Symbol 
ID8388885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand- 
Start bp3881373 
End bp3882041 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content68% 
IMG OID644977579 
ProductGTP cyclohydrolase I 
Protein accessionYP_003135347 
Protein GI257057515 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0302] GTP cyclohydrolase I 
TIGRFAM ID[TIGR00063] GTP cyclohydrolase I 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.289677 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGGGG AGGGCAGTGA CGTGACAACC AACGGCTCCT CTCCGCTCGA GGTCGATCCG 
TTCGAGGTCG ACGCGGAACG CCCCGAGGCC GGTCACGCCG TCTTCGACCA GGAAAGGGCT 
GAACGCGCTG TCCGGGAATT CCTCCTCGCC TGCGGGGAGG ATCCCGACCG CGACGGCCTG 
AGGGAAACAC CGGCCCGGGT CGCACGTGCC TACCGGGAGC TGTTCGCCGG GCTGTACTGC 
GACCCGGACC ACGTGCTGGA CCGGACGTTC GATGAGAGTC ACGAGGAGCT CGTCCTCGTG 
ACGGACATCC CGATCTTCAG TCTCTGCGAG CACCACCTGT TGCCTTTCCA CGGCGTGGCC 
CACGTGGGGT ACATCCCGAA CGGGCAGGGC AAGGTGACGG GTTTGTCGAA GCTCGCGCGC 
CTGGTCGACA TGTACGCGAA GCGGCCGCAG GTCCAGGAGC GGCTCACCTC CCAGGTGGCC 
GACGCGTTGA ACCGCAAGCT CCGCCCGCGG GGCGTGATCG TGGTCGTGGA GGCGGAGCAT 
CTGTGCATGT CGATGCGCGG TGTCCGCAAG CCCGGCTCCC GCACGACCAC GTCGGCGGTG 
CGGGGCCTGT TGCAGTCGTC GGCATCGTCG CGGGCCGAGG CGCTGGAACT CATCAAAGGT 
CGGCGATGA
 
Protein sequence
MIGEGSDVTT NGSSPLEVDP FEVDAERPEA GHAVFDQERA ERAVREFLLA CGEDPDRDGL 
RETPARVARA YRELFAGLYC DPDHVLDRTF DESHEELVLV TDIPIFSLCE HHLLPFHGVA 
HVGYIPNGQG KVTGLSKLAR LVDMYAKRPQ VQERLTSQVA DALNRKLRPR GVIVVVEAEH 
LCMSMRGVRK PGSRTTTSAV RGLLQSSASS RAEALELIKG RR