Gene Svir_35610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_35610 
Symbol 
ID8388882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3879623 
End bp3880114 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content70% 
IMG OID644977576 
Product2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 
Protein accessionYP_003135344 
Protein GI257057512 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 
TIGRFAM ID[TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0689115 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGGG CGGTGTTGTC CCTCGGATCC AATCTGGGTG ACCGGGTCGG CTATCTGCGG 
CTGGCCGTGG ACGGATTGCG GGACGTGCTG GTGGCCGTCT CGTCGGTGTA CGAGACGAAG
CCGTGGGGCG TGACCGACCA ACCGGATTTC CTCAACGCCG TGTGCATCGT CGACGACCCC
GCCCGGGACC ACTGGGCGTG GCTGCGGACG GCGCAGGAGT TGGAGCGCAG GGCCCAGCGG
GTGCGGGAAC GCCGCTGGGG GCCACGCACG CTCGATGTCG ACGTGGTCAC GGTGGACGCG
GTGCGTTCCG ACGACCCGGA GTTGCTGCTG CCCCACCCCG GCGCACATGA GCGTTCGACG
GTGCTGATCC CGTGGTTGGA GATCGATCCC GACGCCGAGG TGCCGGGTCG GGGTAGGGCA
GCCGATCTGC TCGCCGCGCT CGACGAGGAC GACCGTGCGG GCGTGCGCCT CCGTGCTGAC
GTGGTGTTGT GA
 
Protein sequence
MSRAVLSLGS NLGDRVGYLR LAVDGLRDVL VAVSSVYETK PWGVTDQPDF LNAVCIVDDP 
ARDHWAWLRT AQELERRAQR VRERRWGPRT LDVDVVTVDA VRSDDPELLL PHPGAHERST
VLIPWLEIDP DAEVPGRGRA ADLLAALDED DRAGVRLRAD VVL