| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_35140 |
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| Symbol | |
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| ID | 8388836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 3817321 |
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| End bp | 3818259 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644977534 |
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| Product | rRNA methylase, putative, group 3 |
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| Protein accession | YP_003135302 |
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| Protein GI | 257057470 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.939533 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCAAGC AGGGTACGAA GAAGGGTTCG GTCGTCGGTT CCGGCGGGCG ACGTCGCAAG
GGACTCCAGG GCAAGGGGCC GACACCGAAG GCGGAACACC GGCCGGGGCA CCCCGCGCAG
CGCAGGGCCG CCGCGGCCGC GGCTCGCGCC GAGCAGAAGC GGGCGACCGC GAAGAAGGCG
GAGGAGGCTC CCGAGATCAT CGCGGGCCGG AACCCCGTCG TGGAGGCTCT GCGGGCCGAT
GTCCCCGCCA CGGCCCTGTA CGTGGCGCTC AACATCGACG CCGACGACCG CGTGACCGAG
GCCGTGCGCA TGGCCGCCGA CAAGGGCGTC TCGATCCTGG AGGTGCCGCG GACCGAACTC
GATCGCAAGA CGGACGGAGC CGTGCACCAG GGTCTCGGGC TGCAGGTGCC GCCGTTCTCC
TACGCCACGC CCGACGAACT GTTGCAGACT GCGCGGGAGT CCGGCGAACC GCCGCTGCTC
GTGGCGCTCG ACGGGGTCAC CGACCCACGC AATCTCGGGG CGATCATCCG TTCGGCGGCC
GCCTTCGGCG CCCACGGTGT GCTGCTGCCG AGTCGGCGCA GCGCCGGGAT GACCGCGGTG
GCATGGCGCA CGAGCGCGGG GGCGGCCGCG CGGCTGCCGG TGGGCATGGC CACCAACCTC
ACCCGCCAAC TGAAGGAGTG GGCCGCGGAA GGACTGCTGA TCGCGGGACT CGACGCGGAC
GGGTCCACGG ACATCGACAC CATGAACATC GACGTCGACC CGTTGGTCGT GGTGGTGGGT
TCCGAGGGCC GGGGCCTGTC GCGCCTCGTG CGTGAGACGT GTGACTTCAC CGTGTCGATC
CCGATGGCGT CGGGAGTCGA ATCACTCAAC GCCTCAGTCG CGGGTGCCGT ACTGCTCGCC
GAGATCGCCC GTCGCCGCCG TGCCGCGGGA CGGGTGTGA
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| Protein sequence | MRKQGTKKGS VVGSGGRRRK GLQGKGPTPK AEHRPGHPAQ RRAAAAAARA EQKRATAKKA
EEAPEIIAGR NPVVEALRAD VPATALYVAL NIDADDRVTE AVRMAADKGV SILEVPRTEL
DRKTDGAVHQ GLGLQVPPFS YATPDELLQT ARESGEPPLL VALDGVTDPR NLGAIIRSAA
AFGAHGVLLP SRRSAGMTAV AWRTSAGAAA RLPVGMATNL TRQLKEWAAE GLLIAGLDAD
GSTDIDTMNI DVDPLVVVVG SEGRGLSRLV RETCDFTVSI PMASGVESLN ASVAGAVLLA
EIARRRRAAG RV
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