| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_35040 |
|---|
| Symbol | |
|---|
| ID | 8388826 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 3805559 |
|---|
| End bp | 3807091 |
|---|
| Gene Length | 1533 bp |
|---|
| Protein Length | 510 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644977524 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003135292 |
|---|
| Protein GI | 257057460 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2966] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAGATGA AACTGAAGCC GCGCGCTCGT GCGGCACCGC CCAAGCGCCG TCACGCGTGG
CAGATCCTGG AAGCACCAGC CGACGAACAA GCATCGGAAA AGCGCGCACA GCGGCCACCG
CGGGAACGCC GCATCCGCCA GCGCGCCTGG CACATCCTGG AACCACCGAC GGGCGAGCTC
CCCGCGGTGG AGCCGCTCCA GGAAACGGCC ATCGGGCCCG AACTACCCGA CGAAGCGACT
GTTCATTTGG TCCTGGACCT CGTCACGCGC ATCGGTGAGG TCCAGATGGC CAGCGGCGCC
GGCGCATCCG ACGTGACCGC GACAATCTTG GCCCTGACCC GTGCACTCGG TCTACCACAC
TGTGAGGTGG ACGTCATCTT TACGTCCATC ACCGTGAGTT GTCTACGGGG AAGCGAACTG
CCGCCGGTGA CCACACTGCG GGTCGTCCGC TCCCGCAGTC TCGACTACAC GCGGCTATCC
GAGACGGAAC GCCTCGTGCA GCAGCTGCTC CGCAACCGGA TCAGCGCCAC CGACGCCTAC
ACCGAACTAC ACCGGATCAC CGACGCGAGG CATCCCTATC CGCGCTGGGT CTCGACCCTG
GCCTGGGGCG GCATGGCCGC CTTCATCACC CTGCTGCTCG GCGGCACGGG CTGGGTGCCG
TTCATCTCGT TCGTGATCAG CGCGGTCGTG GACCGGTTGG GGAGGTTGCT GAACAAGTAC
GCGCTGCCGT TCTTCTTCCA GCAGGTCGCG GGCGGCTTCG TCGCCACGAC GGCGGCCATC
ACCGTCGTGA ACCTCGACAT CTTCGACCTG GAGAGGCCGA CACTCGTCGT CTCCGCGGCC
TTGACGGTGT TGCTGTCGGG GTTGTCCACC GTCTCTGCGG TGCAGGACGC CATCACCGGC
TACTACGTGA CAGCGGCGGG CAGAATGCTC GAGGTCGTGT TCATGAGTGC GGGGCTGATC
ACCGGTGTCG GTGCCGCCAT CAGCATGGCC ACCCAGTTCG GTGTCACGCG GGCCCCGGAT
CCGACGGTGC CGACCCCCGG GGTGAGCGAG CTGCACATCA TGACACTCGC GGGGATCGGG
GCGGCTGCCT GCTTCGCGCT GGCCTCGTAT TCGAAGGTCC GGCCGCTGCT GGTCGCCGCG
GCGGCGGGCG CGGTGGGTGC CGCCGCGTAC GGGGCGCTCA ACATCCTCGG CTACAACCCG
ATCATCGGTG CTTTCGTCGC CACCACGCTG GTCGGTCTGG GTGGAGGCGT GGTGGCCCGC
CGCCTGAAGG TGACTCCTTT GGTCGTCGCC GTCTCGGGTA TCACGCCGTT GCTGCCTGGA
TTCGCCACCT ATCGGGGCAT GGCCGAACTG ATCGAGGACG GCAGTATCAC CACGTTGATG
TCGGCCGCCG CGATCGGGCT GGCCCTCGCC GCGGGTGTGG TGTTCGGTGA GTTCCTCGCC
CAGCCGGTGA GGACGGGTCT GGGCCGGCTC GAACGCAAGT TGTCCGGGCC TCGGATGGCC
GGGCCGCTGA ACACTGGCCG CCGCATCGAA TAG
|
|---|
| Protein sequence | MEMKLKPRAR AAPPKRRHAW QILEAPADEQ ASEKRAQRPP RERRIRQRAW HILEPPTGEL
PAVEPLQETA IGPELPDEAT VHLVLDLVTR IGEVQMASGA GASDVTATIL ALTRALGLPH
CEVDVIFTSI TVSCLRGSEL PPVTTLRVVR SRSLDYTRLS ETERLVQQLL RNRISATDAY
TELHRITDAR HPYPRWVSTL AWGGMAAFIT LLLGGTGWVP FISFVISAVV DRLGRLLNKY
ALPFFFQQVA GGFVATTAAI TVVNLDIFDL ERPTLVVSAA LTVLLSGLST VSAVQDAITG
YYVTAAGRML EVVFMSAGLI TGVGAAISMA TQFGVTRAPD PTVPTPGVSE LHIMTLAGIG
AAACFALASY SKVRPLLVAA AAGAVGAAAY GALNILGYNP IIGAFVATTL VGLGGGVVAR
RLKVTPLVVA VSGITPLLPG FATYRGMAEL IEDGSITTLM SAAAIGLALA AGVVFGEFLA
QPVRTGLGRL ERKLSGPRMA GPLNTGRRIE
|
|---|
| |