Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_34800 |
Symbol | |
ID | 8388802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3781979 |
End bp | 3783232 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644977500 |
Product | diaminobutyrate--2-oxoglutarate aminotransferase |
Protein accession | YP_003135269 |
Protein GI | 257057437 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
TIGRFAM ID | [TIGR00709] 2,4-diaminobutyrate 4-transaminases [TIGR02407] diaminobutyrate--2-oxoglutarate aminotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.37663 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCATCT TCGAAACGCT CGAATCCGAG GTGCGCAGCT ACAGTCGTGG CTGGCCCACA GTGTTCGATC GAGCGCAGGG TAGTTGGCTC TACTCAGAGG ACGGTAAAGC ATACTTGGAC TTCTTCGCCG GAGCCGGTGC TCTCAACTAC GGGCACAACA ATCCGGTTCT GAAGAAGGCA TTGATCGATT ACATTTCCCG AGACGGCGTG ACCCATGCGT TGGACATGTT CACCGTCGCC AAGCGCGACT TCTTGGAAAC GTTGAATGAC ATCATCCTGA AGCCGCGCGA GATGGATTAC AAGGTCATCT TTCCCGGTCC CGGTGGTGCC AACGCCGTCG AGGCGGCACT GAAACTGGCC CGCAAGGTGA CCGGCAAGGA ATCGGTCATC AACTTCACCA ACGCGTTCCA CGGCATGACG TTGGGCGCGT TGTCGGTGAC GGGTAACTCG ATGAAACGCG GTGGCGCGGG CGTCCCCCTC GTGCACGCCA CGCCGATGCC GTACGACAAG TACTTCGACG GCGCCTATCC GGACTTCCTC TACTTCGAAC GGTTGCTCGA AGACTCCGGC AGCGGGTTGA ACGAGCCCGC CGCGGTCATC GTGGAGACCG TCCAAGGCGA GGGCGGTATC AACGCCGCGC GGCTCGAATG GCTGAAGGGG CTGTCGGATC TGTGCCGACG GCACGACATC CTGCTCATCC TCGACGACGT GCAGATGGGT TGTGGTCGCA CCGGTCCGTT CTTCAGCTTC GAGGAGGCCG GCATCAAACC CGACATGATC TGCCTGTCGA AGTCCATCGG TGGTTACGGG CTACCGCTGG CCATCACGTT GATCCGGCCG GATCTGGACG TATGGGCTCC CGGGGAGCAC AACGGTACGT TCCGCGGCGT CAACCCGGCG TTCGTCACCG CGGCCGAGGC GCTGCGCACC TATTGGCAGG ACGACGATCT GGAGAAGAGC ACCAAGGCGA AGGGTGAGCG GGTGGCCCAG GCGTTCACCG AGTTGGTGGA ACGCTATCCG GAGGCGAACC TGGTCTCCAA GGGACGTGGT CTGGCCCGCG GCCTCGAATT CGAGAACGGT GAGCTGGCGA GCAAGGTCTG TGCCGCGGCA TTCGAACGTG GTCTACTCAT GGAGACCTCC GGTCCCGATG GGGAAGTGGT GAAGTTGCTG CCCGCGCTCA CCACGACAGA GGACGAGATC GAACAGGGGC TGTCGATCAT CGCCGAGTCC GTCGACTCCG TGCTTTCCCG CTGA
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Protein sequence | MSIFETLESE VRSYSRGWPT VFDRAQGSWL YSEDGKAYLD FFAGAGALNY GHNNPVLKKA LIDYISRDGV THALDMFTVA KRDFLETLND IILKPREMDY KVIFPGPGGA NAVEAALKLA RKVTGKESVI NFTNAFHGMT LGALSVTGNS MKRGGAGVPL VHATPMPYDK YFDGAYPDFL YFERLLEDSG SGLNEPAAVI VETVQGEGGI NAARLEWLKG LSDLCRRHDI LLILDDVQMG CGRTGPFFSF EEAGIKPDMI CLSKSIGGYG LPLAITLIRP DLDVWAPGEH NGTFRGVNPA FVTAAEALRT YWQDDDLEKS TKAKGERVAQ AFTELVERYP EANLVSKGRG LARGLEFENG ELASKVCAAA FERGLLMETS GPDGEVVKLL PALTTTEDEI EQGLSIIAES VDSVLSR
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