Gene Svir_34620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_34620 
Symbol 
ID8388785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3768229 
End bp3768678 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content70% 
IMG OID644977483 
Producttranscriptional regulator 
Protein accessionYP_003135252 
Protein GI257057420 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.106002 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAGT CGAACGAGCC GTCCTCCGAC GTACCCGGCA GGCTGTTTCT CACTATAGGA 
CGGCTGTCCC GGACACTGCG CCAGGCCGGG GCGCCGGGAC CGGGGACCGG GGCGATCTCG
GCCATGGCCA CGCTCGCCGC CTGCGGCCGG ATGAGGCTGG GTGATCTCGC CGCCCGGGAA
GGGGTCGCGG CGGCCACCAT GTCGCGCATC GTCTCGGCGT TGGTCGACAG CGGCTACCTG
TATCGGGAAT CCGATCCGGT GGATCGGCGG GCCTGGCTGG TGGCGCTCAC GGACGAGGGG
GAGCGACTGT TGGCCGAGGT GCAGTCCACC CGTGTCCGGG AGTTGAGCAA GCGGATCGAC
CGGCTCTCCC CGGAGCACAA AAGCGCCCTC ATCGCGGCTG TCCCCGCTCT TGAGGCCCTG
CTCGAGGACG AGGAGCGTTC CCGCGGTTGA
 
Protein sequence
MTESNEPSSD VPGRLFLTIG RLSRTLRQAG APGPGTGAIS AMATLAACGR MRLGDLAARE 
GVAAATMSRI VSALVDSGYL YRESDPVDRR AWLVALTDEG ERLLAEVQST RVRELSKRID
RLSPEHKSAL IAAVPALEAL LEDEERSRG