Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_34620 |
Symbol | |
ID | 8388785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3768229 |
End bp | 3768678 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644977483 |
Product | transcriptional regulator |
Protein accession | YP_003135252 |
Protein GI | 257057420 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.106002 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGAGT CGAACGAGCC GTCCTCCGAC GTACCCGGCA GGCTGTTTCT CACTATAGGA CGGCTGTCCC GGACACTGCG CCAGGCCGGG GCGCCGGGAC CGGGGACCGG GGCGATCTCG GCCATGGCCA CGCTCGCCGC CTGCGGCCGG ATGAGGCTGG GTGATCTCGC CGCCCGGGAA GGGGTCGCGG CGGCCACCAT GTCGCGCATC GTCTCGGCGT TGGTCGACAG CGGCTACCTG TATCGGGAAT CCGATCCGGT GGATCGGCGG GCCTGGCTGG TGGCGCTCAC GGACGAGGGG GAGCGACTGT TGGCCGAGGT GCAGTCCACC CGTGTCCGGG AGTTGAGCAA GCGGATCGAC CGGCTCTCCC CGGAGCACAA AAGCGCCCTC ATCGCGGCTG TCCCCGCTCT TGAGGCCCTG CTCGAGGACG AGGAGCGTTC CCGCGGTTGA
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Protein sequence | MTESNEPSSD VPGRLFLTIG RLSRTLRQAG APGPGTGAIS AMATLAACGR MRLGDLAARE GVAAATMSRI VSALVDSGYL YRESDPVDRR AWLVALTDEG ERLLAEVQST RVRELSKRID RLSPEHKSAL IAAVPALEAL LEDEERSRG
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