Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_34360 |
Symbol | |
ID | 8388760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 3740891 |
End bp | 3742537 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644977458 |
Product | DNA/RNA helicase, superfamily II |
Protein accession | YP_003135227 |
Protein GI | 257057395 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1061] DNA or RNA helicases of superfamily II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTGATG GCCCTCTGAT CGTCCAGTCG GATAAAACGG TGCTGCTCGA GGTCGACCAC GAGCTCGCCG AGGACGCGCG CATCGCCATC GCGCCGTTCG CCGAACTCGA ACGCGCCCCC GAACACGTCC ACACTTACCG GGTGACCCCG CTGGCGCTGT GGAACGCGCG CGCGGCCGGA CACGATGCCG AGCAGGTCGT CGATGCCCTG ACCAGGTACT CCCGTTTCCC CGTGCCGCAG CCGTTGCTCA TCGACATCGT CGACACGATG GGCCGGTTCG GCAGGCTGCA GATCCACAAC CACCCGGCAC ACGGCCTGGT GATGACCACC ACCGACCGCG CGGTGCTGGA AGAGGTCCTG CGGAACAAGA AGATCAGCCC GATGCTGGGC ACCCGCATCG ACCCGGACAC CGTCGTGGTG TACCCGTCCG AGCGGGGACG TCTGAAGCAG GCGCTGCTGA AAGTCGGCTG GCCCGCCGAG GACCTCGCGG GGTACGTGGA CGGCGAATCC CACCCGATCG CGCTGGAGGA GAACGGCTGG GCACTGCGTG ACTACCAACG CCAGGCGGCG GACGCGTTCT GGGCGGGAGG CTCCGGCGTC GTCGTGCTGC CCTGCGGCGC GGGTAAGACC CTGGTCGGCG CGGCCGCGAT GGCGCAGGCG CAGGCCACCA CGCTCATCCT CGTCACCAAC ACGGTCGCGG GCAGGCAGTG GAAACGCGAA CTCGTGGAGC GCACCTCGCT CACCGAGGAC GAGATCGGCG AGTACTCGGG CGAGAAGAAG GAGATCCGCC CCGTCACCAT CGCCACGTAC CAGGTCATCA CCCGCCGTAG CAAAGGCGAG TACAAGCACC TCGAGTTGTT CGACTCCCGT GACTGGGGAT TGATCATCTA CGACGAGGTG CATCTGCTGC CCGCCCCGGT GTTCCGGATG ACGGCTGACC TCCAGTCCCG GAGGCGGCTC GGCCTCACCG CGACACTGGT GCGGGAGGAC GGGCGTGAGG GTGACGTGTT CTCCCTGATC GGCCCGAAAC GTTACGACGT CCCCTGGCGC GACATCGAGG CCCAGGGCTG GATCGCCCCC GCCGAATGCG TCGAGGTCCG AGTGACCCTC ACCGACGCCG AACGCCTCGC CTACGCCACC GCCGACAGCG AGGAGCGCTA CCGGCTCGCC TCCACCGCGC GCACCAAGAA CAAGGTCATC TCCTCGATCG TGGACAAGCA CGCGGGCGAA CCCACCCTCG TCATCGGTGC CTATCTCGAT CAGTTGGAGG AGCTCGGCGC CGAACTCGAC GCCCCGGTCG TGCAGGGGTC CACGAGGAAC AAGGAACGCG AGGCGCTGTT CGACGCCTTC CGCAGGGGTG AGATCGACAA GCTCGTGGTG TCCAAGGTCG CGAACTTCTC CATCGACCTG CCGGAGGCGT CGGTGGCCAT CCAGGTGTCG GGCACCTTCG GCTCCCGACA GGAGGAGGCC CAGCGGCTCG GCAGGTTGCT GCGACCCAAA AGCGACGGGC GGCAGGCACA CTTCTACTCC GTCGTCGCCC GCGACACCGT GGACACCGAG TACGCCGCCC ACCGGCAACG GTTCCTCGCC GAACAGGGCT ACGCCTACCA CATCGTCGAC GCCGACGACC TGCTCCGGCC GCTGTGA
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Protein sequence | MTDGPLIVQS DKTVLLEVDH ELAEDARIAI APFAELERAP EHVHTYRVTP LALWNARAAG HDAEQVVDAL TRYSRFPVPQ PLLIDIVDTM GRFGRLQIHN HPAHGLVMTT TDRAVLEEVL RNKKISPMLG TRIDPDTVVV YPSERGRLKQ ALLKVGWPAE DLAGYVDGES HPIALEENGW ALRDYQRQAA DAFWAGGSGV VVLPCGAGKT LVGAAAMAQA QATTLILVTN TVAGRQWKRE LVERTSLTED EIGEYSGEKK EIRPVTIATY QVITRRSKGE YKHLELFDSR DWGLIIYDEV HLLPAPVFRM TADLQSRRRL GLTATLVRED GREGDVFSLI GPKRYDVPWR DIEAQGWIAP AECVEVRVTL TDAERLAYAT ADSEERYRLA STARTKNKVI SSIVDKHAGE PTLVIGAYLD QLEELGAELD APVVQGSTRN KEREALFDAF RRGEIDKLVV SKVANFSIDL PEASVAIQVS GTFGSRQEEA QRLGRLLRPK SDGRQAHFYS VVARDTVDTE YAAHRQRFLA EQGYAYHIVD ADDLLRPL
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