| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_33950 |
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| Symbol | |
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| ID | 8388719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3696485 |
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| End bp | 3697729 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644977417 |
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| Product | arabinose efflux permease family protein |
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| Protein accession | YP_003135186 |
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| Protein GI | 257057354 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.466548 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.73086 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGCCT CTCTTCGAGT TCGCAACTAT CGTCTCTTCT TCAGCGGCCA GGTCATCTCC
AACATCGGCA CCTGGATGCA GCGCATCGCC CAGGACTGGC TGGTGTTCGA GCTCAGTGGC
TACAACTCGG TAGCCCTCGG CATCGCCGTC GCGTTGCAGT TCCTGCCGAC CCTGCTGCTG
TCGTTGTGGG CCGGGGTGCT CGCCGACCGC GTCGACAAGC GCAAGCTGCT GATCGCGATC
CAGTCCGGCG TCGCGCTCCA GGCCCTCGTG CTCGGCGTGC TGGTGTTGGG TGGCGCGGCC
CAACTGTGGC AGGTCTACCT GCTGTGTCTC GTGCTCGGCG TCCTGTCGGC GCTCGAGGTG
CCCACCCGGC AGTCGTTCGT GGCCGAGATG GTGGGACGTG ACCAGACCGC CAACGCGGTC
GCGCTGAACT CGTCGATCTT CAACCTGGCC CGGATCGTCG GCCCCGCCAT CGCCGGGTTC
ACGATCGTGC TCGTCGGCAT GGGCTGGTTG TTCATCGCCA ACGCCCTCAG CACCGTGGCC
GTCATCGCCG GTCTTGCGCT GATGAACCCG TCCGAGCTGT TCCGGGCTCC CGCCGTCGAT
CGTGCCAAGG GGCAGCTGCG CGAGGGGTTG CGCTACGTGC GCAACAGGCC CGACCTGGTG
ACCGTGATGG TGCTCGTGTT CTTCGTCAGC ACGTTCGGCA TCACGTTCTT CACCTCGCTC
GCCATCGTGG CGGCCAACGT CTTCGGTACC GAGGCCGACG GTTACGGAAT GCTCTCCACG
TTGCTCGCCG TGGGTACCTT CACGGGCGCG TTGCTCTCCG CCCGCAGGGG TAGCAGGGGC
GGTCCGAGCC TGCGGCTGTT GCTGATCTCC GCGTTCGCGC TGGGGTTGAT CGAGTTCGTC
GGCGCCTTCA TGCCCACGTA CGCGCTGTTC GGGCTGGCCC TCGTGCCGCT GGGCTTCGCC
ACGATCACGT TCCTCAACAC GGCCAACGCG CTCGTGCAGA CGACGGTGAG CCCGCAGATG
CGGGGGCGGG TGATGGGGCT GTACGTGCTG GTCGTGATGG GTGGCAACCC GATCGGCGGT
CCGATGACCG GGTGGATGGC CGACACCTTC GGCGGGCGGT CCCCGTTCTA CATCGGTGGG
GCGATCGCCC TCATCGCGGC CGTGGTCTGC GGATATCTGG CCCAGCGGGC GCAGCAGCGA
AGTGGGGCGG GTTCACCCCT TGCCCAGTCG ATGAGGTTAG GCTAA
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| Protein sequence | MFASLRVRNY RLFFSGQVIS NIGTWMQRIA QDWLVFELSG YNSVALGIAV ALQFLPTLLL
SLWAGVLADR VDKRKLLIAI QSGVALQALV LGVLVLGGAA QLWQVYLLCL VLGVLSALEV
PTRQSFVAEM VGRDQTANAV ALNSSIFNLA RIVGPAIAGF TIVLVGMGWL FIANALSTVA
VIAGLALMNP SELFRAPAVD RAKGQLREGL RYVRNRPDLV TVMVLVFFVS TFGITFFTSL
AIVAANVFGT EADGYGMLST LLAVGTFTGA LLSARRGSRG GPSLRLLLIS AFALGLIEFV
GAFMPTYALF GLALVPLGFA TITFLNTANA LVQTTVSPQM RGRVMGLYVL VVMGGNPIGG
PMTGWMADTF GGRSPFYIGG AIALIAAVVC GYLAQRAQQR SGAGSPLAQS MRLG
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