Gene Svir_33630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_33630 
Symbol 
ID8388687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3659367 
End bp3660527 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content70% 
IMG OID644977385 
Productacyl-CoA dehydrogenase 
Protein accessionYP_003135154 
Protein GI257057322 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.732719 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACGA GGCCCACCGT GCAACGCCTG CTCCCCGACA CCGAATCCGA GGACCTGCTG 
GCCCTCGCCC GCGAGATCGC CCGCGAGGAA CTGGCCCCCC TGGCCGCCGA GTACGAGGAG
AAGGAGATCT TCCCCCGCGA GCAGTTCCGC ATCCTGGGCT CCGCGGGGCT GTTGGGACTG
CCCTACCCGG AACGCTGGGG TGGCGGCGAC GTGCCCTACG AGGTGTACCT CCAGGTCCTG
GAGGAGATCG CCGCGGCGTG GATGTCGGTC GGGGTCGGTC TGTCGGTGCA CACGATGTCG
TGCTACGCGC TGGCCCACTA CGGCAGCGAC GAACAACGCG ACCGTTGGCT TCCCGCCATG
CTGGGCGGCG ACCTCCTCGG TGCGTACGCG CTGTCGGAAC CGCACGCCGG GTCGGACGCC
GCCGCGCTGT CCACCCGGGC CCGACGGGAC GGCGACGCCT ACGTGGTCAA CGGGGTCAAG
GCGTGGACCA CCCACGGCGG ACAGGCCGAC TACTACACGA CGATGGTGCG CACGTCGGAC
GACGGGGGCA AAGGCATCAG CTGCCTGCTC GTGGACGCGG ACACACCGGG CATGTCGGCC
GCACCGCCCG AGCGGAAGAT GGGGCTCACC GGGTCCACCA CAGCGCAGAT GATCTTCGAG
GACGCCCGTG TGGACGCCGA TCGACTCATC GGCGCCGAGG GCGAGGGATT GAGGATCGCA
CTGTCGTCGC TGGCGTCCGG ACGCCTCGGG ATCGCCGCGT GTTCGGTGGG TCTGGCGCAG
GCGGCGCTCG ACGAGGCCGT CGCCTACGCG AAGCAGCGCA CCCAGTTCGG CAAGCCGATC
ATCGACTTCC AAGGACTGGA GTTCCTGCTC GCGGACATGG CCGCCGCCGT GGAATCGGCG
CGCGCGACCT ATCTCGACGC CGCCCGCCGT AGGGACCGGG GGCTGCCCTT CCAGAAGCAG
TCGTCGATAG CCAAGCTGGT CGCCACCGAC GCCGCCATGA AGGTGACCAC GGACGCCGTG
CAGGTGTTCG GCGGCGCCGG GTACACCCGC GACTTCCCGG TCGAGCGGTA CATGCGCGAG
GCGAAGGTGC CGCAGATCTT CGAGGGCACC AACCAGATCC AGCGCCTGGT CATCGCGCGG
GAACTGCGTA AGGCCTACTG A
 
Protein sequence
MPTRPTVQRL LPDTESEDLL ALAREIAREE LAPLAAEYEE KEIFPREQFR ILGSAGLLGL 
PYPERWGGGD VPYEVYLQVL EEIAAAWMSV GVGLSVHTMS CYALAHYGSD EQRDRWLPAM
LGGDLLGAYA LSEPHAGSDA AALSTRARRD GDAYVVNGVK AWTTHGGQAD YYTTMVRTSD
DGGKGISCLL VDADTPGMSA APPERKMGLT GSTTAQMIFE DARVDADRLI GAEGEGLRIA
LSSLASGRLG IAACSVGLAQ AALDEAVAYA KQRTQFGKPI IDFQGLEFLL ADMAAAVESA
RATYLDAARR RDRGLPFQKQ SSIAKLVATD AAMKVTTDAV QVFGGAGYTR DFPVERYMRE
AKVPQIFEGT NQIQRLVIAR ELRKAY