Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_33630 |
Symbol | |
ID | 8388687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 3659367 |
End bp | 3660527 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644977385 |
Product | acyl-CoA dehydrogenase |
Protein accession | YP_003135154 |
Protein GI | 257057322 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.732719 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCACGA GGCCCACCGT GCAACGCCTG CTCCCCGACA CCGAATCCGA GGACCTGCTG GCCCTCGCCC GCGAGATCGC CCGCGAGGAA CTGGCCCCCC TGGCCGCCGA GTACGAGGAG AAGGAGATCT TCCCCCGCGA GCAGTTCCGC ATCCTGGGCT CCGCGGGGCT GTTGGGACTG CCCTACCCGG AACGCTGGGG TGGCGGCGAC GTGCCCTACG AGGTGTACCT CCAGGTCCTG GAGGAGATCG CCGCGGCGTG GATGTCGGTC GGGGTCGGTC TGTCGGTGCA CACGATGTCG TGCTACGCGC TGGCCCACTA CGGCAGCGAC GAACAACGCG ACCGTTGGCT TCCCGCCATG CTGGGCGGCG ACCTCCTCGG TGCGTACGCG CTGTCGGAAC CGCACGCCGG GTCGGACGCC GCCGCGCTGT CCACCCGGGC CCGACGGGAC GGCGACGCCT ACGTGGTCAA CGGGGTCAAG GCGTGGACCA CCCACGGCGG ACAGGCCGAC TACTACACGA CGATGGTGCG CACGTCGGAC GACGGGGGCA AAGGCATCAG CTGCCTGCTC GTGGACGCGG ACACACCGGG CATGTCGGCC GCACCGCCCG AGCGGAAGAT GGGGCTCACC GGGTCCACCA CAGCGCAGAT GATCTTCGAG GACGCCCGTG TGGACGCCGA TCGACTCATC GGCGCCGAGG GCGAGGGATT GAGGATCGCA CTGTCGTCGC TGGCGTCCGG ACGCCTCGGG ATCGCCGCGT GTTCGGTGGG TCTGGCGCAG GCGGCGCTCG ACGAGGCCGT CGCCTACGCG AAGCAGCGCA CCCAGTTCGG CAAGCCGATC ATCGACTTCC AAGGACTGGA GTTCCTGCTC GCGGACATGG CCGCCGCCGT GGAATCGGCG CGCGCGACCT ATCTCGACGC CGCCCGCCGT AGGGACCGGG GGCTGCCCTT CCAGAAGCAG TCGTCGATAG CCAAGCTGGT CGCCACCGAC GCCGCCATGA AGGTGACCAC GGACGCCGTG CAGGTGTTCG GCGGCGCCGG GTACACCCGC GACTTCCCGG TCGAGCGGTA CATGCGCGAG GCGAAGGTGC CGCAGATCTT CGAGGGCACC AACCAGATCC AGCGCCTGGT CATCGCGCGG GAACTGCGTA AGGCCTACTG A
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Protein sequence | MPTRPTVQRL LPDTESEDLL ALAREIAREE LAPLAAEYEE KEIFPREQFR ILGSAGLLGL PYPERWGGGD VPYEVYLQVL EEIAAAWMSV GVGLSVHTMS CYALAHYGSD EQRDRWLPAM LGGDLLGAYA LSEPHAGSDA AALSTRARRD GDAYVVNGVK AWTTHGGQAD YYTTMVRTSD DGGKGISCLL VDADTPGMSA APPERKMGLT GSTTAQMIFE DARVDADRLI GAEGEGLRIA LSSLASGRLG IAACSVGLAQ AALDEAVAYA KQRTQFGKPI IDFQGLEFLL ADMAAAVESA RATYLDAARR RDRGLPFQKQ SSIAKLVATD AAMKVTTDAV QVFGGAGYTR DFPVERYMRE AKVPQIFEGT NQIQRLVIAR ELRKAY
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