Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_33580 |
Symbol | |
ID | 8388682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 3653332 |
End bp | 3654036 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644977380 |
Product | Endonuclease V |
Protein accession | YP_003135149 |
Protein GI | 257057317 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1515] Deoxyinosine 3'endonuclease (endonuclease V) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.233481 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.688639 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAAGTCC GGCTCGACGA ACCGTGGCCG ACGACCGTGG CGGAAGCCGT GGCCCTACAG GAACGGTTGC GGCACCGGGT GAGCGCGGTC GACTCCCGGC CGGGGCCGGT GCGCACGGTC GCGGGTGTGG ACGTGGCCTA CGACCGGGAC TCGTCCCGAA TCGCCGCGGC GGTGGTCGTG CTCGACTACA CCACTTTGGA GGTGGTGCAA ACCTCCACCG CACTGTCCAC AGCGACATTT CCGTACGAAC CGGGCCTATT CGCCTTCCGG GAATTGCCCG CGGTGGTCGA GGCCTTGCGC GGACTGAGCG TCGATCCGGA CTTATTGGTA TGCGACGGAC ACGGATTGGC GCATCCACGG CGGTTCGGTT TGGCCTGCCA CCTCGGCGTG CTCACGGGCA TACCGACGTT CGGGGTGGCG AAGACGGTAT TCATCGGCGA ATTCGCGCCT CCGGCGACCC GCCGGGGTTC GTGGTCACCG CTGATTGTGG ACACCGACGT CGTCGGGGCG GCCCTGCGCA CTCGCAGCGG CGTGAAACCG GTCTTCGTGT CGGTCGGTCA TCGGATCAGT CTCGATACCG CGCGTGAGCA CACTTTGACT TTGTGTACGC AGTATCGGCT TCCCGAAACG ACCCGCCAGG CCGATCGACT CTCCCGCACG ACCCTGATCG AGCACACCGG CCCTGACGGC TCCGGCGCTA CATGA
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Protein sequence | MEVRLDEPWP TTVAEAVALQ ERLRHRVSAV DSRPGPVRTV AGVDVAYDRD SSRIAAAVVV LDYTTLEVVQ TSTALSTATF PYEPGLFAFR ELPAVVEALR GLSVDPDLLV CDGHGLAHPR RFGLACHLGV LTGIPTFGVA KTVFIGEFAP PATRRGSWSP LIVDTDVVGA ALRTRSGVKP VFVSVGHRIS LDTAREHTLT LCTQYRLPET TRQADRLSRT TLIEHTGPDG SGAT
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