Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_33520 |
Symbol | |
ID | 8388676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3647064 |
End bp | 3647855 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644977374 |
Product | transcriptional regulator |
Protein accession | YP_003135143 |
Protein GI | 257057311 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.422261 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.208572 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACAGTT CTCAGAGCCG CCCCGGAGGC GGAACACAGC TTCCGAGTCG CCGGGTGGCG AGCGAATTGC GTACCGCGAT TGCCTCGGGT GACCTGCCTC CCGGCGCCAA GCTGCCGTCC GAGCGCGCAT TGGCCGCCCG GTACGGGGTG GCCCGCAACA CCGCTCGCGA GGCCATTCGC CTGCTCGCCG AGGAGGGCCT GGTCACCGCG CACCACGGCA AGGGTGTGTT CGTCCGTGAG AAGCGACGCC TTCTCCGCTT CGGCAGCGAG CGCTACTCGC ACCGGCTACG CAAGGAGACG GGGTTGTCGC CTTACCGCGC CGAGGTGGCC AAGCAGGGCC GCACGGCCCG CGTGGACTGC ACGTCGATCG AGCGGGTCCG GCCGCCCGAG GACGTCGCCG AACGTCTGGG CGTCGACCCG GCCGAGCCGT CTGCGGTGCG GCGGGAGAAC TGGTACTACG CCGACGACGA ACCCGTTCAG ATCGGCGTCA CCTACATCCC GTGGGAGATC GCCGAAGGCT CGGTGCTGGC CACGTCGGCG AACATGGGCA AAGGCAGCCT GTACGCGCGG TTCGAGGAGC TCGGGCACCC GATCACCCGC ATCCGTGAAG AGGTGTCCGC CCGCATGCCC ACGCACGAGG AAGCCATAGG GCTGTCCATC CCGGACGGTG TTCCGGTGGT GGAGGTCCTC CACACCGGCA TCGACCATCT CGACCGCCCG TTCGAGGTGA CCAGGTTCGT CATGCGCGCC GATCTGAACG GCCTGGACTA CACCATGCCC GTGGAGGACT GA
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Protein sequence | MNSSQSRPGG GTQLPSRRVA SELRTAIASG DLPPGAKLPS ERALAARYGV ARNTAREAIR LLAEEGLVTA HHGKGVFVRE KRRLLRFGSE RYSHRLRKET GLSPYRAEVA KQGRTARVDC TSIERVRPPE DVAERLGVDP AEPSAVRREN WYYADDEPVQ IGVTYIPWEI AEGSVLATSA NMGKGSLYAR FEELGHPITR IREEVSARMP THEEAIGLSI PDGVPVVEVL HTGIDHLDRP FEVTRFVMRA DLNGLDYTMP VED
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