Gene Svir_33520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_33520 
Symbol 
ID8388676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3647064 
End bp3647855 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content69% 
IMG OID644977374 
Producttranscriptional regulator 
Protein accessionYP_003135143 
Protein GI257057311 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.422261 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.208572 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACAGTT CTCAGAGCCG CCCCGGAGGC GGAACACAGC TTCCGAGTCG CCGGGTGGCG 
AGCGAATTGC GTACCGCGAT TGCCTCGGGT GACCTGCCTC CCGGCGCCAA GCTGCCGTCC
GAGCGCGCAT TGGCCGCCCG GTACGGGGTG GCCCGCAACA CCGCTCGCGA GGCCATTCGC
CTGCTCGCCG AGGAGGGCCT GGTCACCGCG CACCACGGCA AGGGTGTGTT CGTCCGTGAG
AAGCGACGCC TTCTCCGCTT CGGCAGCGAG CGCTACTCGC ACCGGCTACG CAAGGAGACG
GGGTTGTCGC CTTACCGCGC CGAGGTGGCC AAGCAGGGCC GCACGGCCCG CGTGGACTGC
ACGTCGATCG AGCGGGTCCG GCCGCCCGAG GACGTCGCCG AACGTCTGGG CGTCGACCCG
GCCGAGCCGT CTGCGGTGCG GCGGGAGAAC TGGTACTACG CCGACGACGA ACCCGTTCAG
ATCGGCGTCA CCTACATCCC GTGGGAGATC GCCGAAGGCT CGGTGCTGGC CACGTCGGCG
AACATGGGCA AAGGCAGCCT GTACGCGCGG TTCGAGGAGC TCGGGCACCC GATCACCCGC
ATCCGTGAAG AGGTGTCCGC CCGCATGCCC ACGCACGAGG AAGCCATAGG GCTGTCCATC
CCGGACGGTG TTCCGGTGGT GGAGGTCCTC CACACCGGCA TCGACCATCT CGACCGCCCG
TTCGAGGTGA CCAGGTTCGT CATGCGCGCC GATCTGAACG GCCTGGACTA CACCATGCCC
GTGGAGGACT GA
 
Protein sequence
MNSSQSRPGG GTQLPSRRVA SELRTAIASG DLPPGAKLPS ERALAARYGV ARNTAREAIR 
LLAEEGLVTA HHGKGVFVRE KRRLLRFGSE RYSHRLRKET GLSPYRAEVA KQGRTARVDC
TSIERVRPPE DVAERLGVDP AEPSAVRREN WYYADDEPVQ IGVTYIPWEI AEGSVLATSA
NMGKGSLYAR FEELGHPITR IREEVSARMP THEEAIGLSI PDGVPVVEVL HTGIDHLDRP
FEVTRFVMRA DLNGLDYTMP VED