| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_33250 |
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| Symbol | |
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| ID | 8388649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 3609040 |
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| End bp | 3610650 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644977347 |
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| Product | long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_003135116 |
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| Protein GI | 257057284 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.894837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.430514 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGACG ACCAGCTGTC ACTGGCCTAT CTGCTGCAGT ACGGTGCGCG GCTGCACGCC
AACGCCGAAG TGGCCACCTG GACCGGGTCC GGCACACGCA AATCAACGTT CGCCCAGGTC
GGCAAGCGAT CCGCTCAGCT GGCCCACGCT CTGCGCAGCC TCGGCGTCAC GGGTGATCAG
CGTGTCGGCA CGTTCATGTG GAACAACACC GAGCACCTGG AGTGCTACAT GGCCATTCCG
GCCATGGGCG CGGTACTGCA CACCCTGAAC ATCCGGTTGT TCCCCGAACA GCTCGTCTAT
GTGGCCAACC ACGCCGAGGA CCACGTGGTG ATAGTCGATG GCTCACTCAT CCCGCTGTTC
GCCAAACAGC TGCCGGAGAT GAAGACCGTC AAACACGTGG TCGTGGCCAA CGGTGACCCG
GCGTCGCTGG AGGCGCCCTC GGGCGTCACG GTGCATTCGT ACGAGGAACT GTTGTCCGGC
CGGCCGGAGA CGTTCGACTG GCCGGAGATC GACGAGCGTT CCGCCGCGGC CATGTGCTAC
ACGTCCGGGA CCACGGGCGA CCCGAAGGGT GTCGTCTACT CGCATCGATC CATCTGGCTG
CACTCGATGC AGATCTGCAT GAGCAACACG ATGCGGCTGT CCGACGAGGA CAGGGCCTTG
GTCATCGTCC CCATGTTCCA CGCGATGTCG TGGGGTATGC CCTACGCCGG ATTCATGGTG
GGCGCGTCCA TGGTGCTGCC CGACCGGTTC CTCCAGCCCG GCCCGATCGC CGAGATCCTG
GCCGCGGAGA AACCGACGTT CGCCGGGGCG GTGCCCACCA TCTGGCAGGG CCTGCTGCAG
CACCTCGACG CGAACCCGCA GGACATCTCG CACCTGCGGG AGGTCGTGGT GGGCGGCTCG
GCCGCGCCGC CCGCGATGAT GCACGCCTTC GAGGAGCGCT ACAACGTCCC GGTGCTGCAC
GCCTGGGGGA TGACCGAGAC GTCGCCGATG GGCAGCGTGG CACGGCCACC GGCGGGGGTG
ACGGGCCAGC AGGCGTGGGA GTACCGCTAC ACGCAGGGCC GCTTCCCCGC CAACGTCAAG
GCCAGGCTCG TCGACGACGA CGGCAACGAG GTGCCGTGGG ACGGGAAGAG CGTCGGCGAA
TTGGAGGTCA AGGGCCCGTG GATCGCCGGC TCGTACTACG GCGACGCGGA CCCGGAGAAG
TTCCACGACG GCTGGTTGCG CACCGGTGAC GTCGGCAAGA TCACGCCCGA CGGGTACCTG
ACCCTGACCG ACCGCGCCAA GGACGTCATC AAGTCCGGTG GGGAGTGGAT CTCCTCGGTG
GATCTGGAGA ACGCGGTGAT GGCGCATCCG GCGGTGGCCG AGGCGGCCGT CATCGGCATC
CCCGACGAGA AGTGGGACGA ACGTCCGCTC GTCGCCGTCG TCGTGCGGGA GGGCCGGCAG
GTGACGGCCG AGGAACTGCG CGAATTCCTC GCCGACAAGG TCGCCAAGTG GCAGCTGCCC
GAGAACTGGA CGTTCGTGGA GGAGGTCCCG AAGACCAGCG TCGGCAAGTT CGACAAGAAG
CGCCTACGCT CCGCCCACGC CGACGGCAAA CTGGACGTCA TCCACTTCTA G
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| Protein sequence | MQDDQLSLAY LLQYGARLHA NAEVATWTGS GTRKSTFAQV GKRSAQLAHA LRSLGVTGDQ
RVGTFMWNNT EHLECYMAIP AMGAVLHTLN IRLFPEQLVY VANHAEDHVV IVDGSLIPLF
AKQLPEMKTV KHVVVANGDP ASLEAPSGVT VHSYEELLSG RPETFDWPEI DERSAAAMCY
TSGTTGDPKG VVYSHRSIWL HSMQICMSNT MRLSDEDRAL VIVPMFHAMS WGMPYAGFMV
GASMVLPDRF LQPGPIAEIL AAEKPTFAGA VPTIWQGLLQ HLDANPQDIS HLREVVVGGS
AAPPAMMHAF EERYNVPVLH AWGMTETSPM GSVARPPAGV TGQQAWEYRY TQGRFPANVK
ARLVDDDGNE VPWDGKSVGE LEVKGPWIAG SYYGDADPEK FHDGWLRTGD VGKITPDGYL
TLTDRAKDVI KSGGEWISSV DLENAVMAHP AVAEAAVIGI PDEKWDERPL VAVVVREGRQ
VTAEELREFL ADKVAKWQLP ENWTFVEEVP KTSVGKFDKK RLRSAHADGK LDVIHF
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