| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_33180 |
|---|
| Symbol | |
|---|
| ID | 8388642 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 3602434 |
|---|
| End bp | 3603963 |
|---|
| Gene Length | 1530 bp |
|---|
| Protein Length | 509 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644977340 |
|---|
| Product | acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II |
|---|
| Protein accession | YP_003135109 |
|---|
| Protein GI | 257057277 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0193282 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCTG ACGATCTCGT GGGGCTGCTG CGTCACGCAG CCGTCACCTG GCCCGACAAG
ACCGCCTGGG TCTTCGACGC GACGGATGAT CGGCTGACCT TCGCCGACCT CGCCGACCGG
GTCGAGGCAC TGGCGGGCTC ACTGCACGCA CTCGGAGTCC GACGCGGTGA CCACGTCGCC
GTGATGCTCG AGAATCAGCC CGAGTTCCCG CTGACGTGGT TGGCACTGGC TCGACTGGGC
GCCGTGTTGG TGCCCGTGAA CACCAACTAC CGCGAGCTGG ACGGCCGACA CGTGCTCGCG
CACTCCGGAG CCCGGTTCGT CGTCGCCGGG GAACGGTTCA CCGAACTGCT CACCACCATC
GCACCGAAGA CGTCGGTAGA GCGGGTACTG ACCTTCTCCG AACTGCCGGA CGGGGACGAA
CCGCCCGCGT ACGAACCCGC GCCCGAACTG CCCACCAACA TCCAGTACAC CTCCGGCACC
ACCGGAGCGC CGAAGGGATG CGTACTGCCG CACCGATACT GGACGACACT GGCCGGCGGC
CTCGTCGCGG ATTTCCCGAA CATCAATGCC GAAGACACGA TATTGACCGC GCAGCCGTTC
CATTACATCG ATCCGCAATG GAATGTCGCA TTAGGACTTG CATCTGGTGC GACACTCGTG
GTGCTCGACC GTTTCCATCC TTCGACGTTC TGGCAGAAGG TGCGCGAACA CGGCGTCACG
TGGTTCTACT GCCTGGGACT CATGCCGACA CTGCTGCTGC GCATGCCCCC GAGCGAAGCC
GATCGGGACC ACCGGGTACG GGCGATCAGT GCGTCCGCCA TCCCCAAGGA ATTGCACGCC
GAACTCGAAC AGCGCTGGGG CGTACCGTGG TTCGAGGCGT TCGGCATGAC CGAGACCGGT
GGTGACATCC GCATGGACCC CGCCGATCAC GACGAGTACG TCGGCACGGG CTGCCTCGGC
AGGCCCGCGC CCGGGCGTGA GGTGATGATC GCCGATGAAC ACGGCCGCCC CGTGCCCCGC
GGGCAGGAGG GCGAGCTGCT CATCCGAGGC GTCGGTCTCA TGCACGGCTA CCACGACGAC
CCTGAGGCCA CGGCGCGGGC GTTTCGGGGT GGCTGGTTCC GCACGGGCGA CGTGGCCCGC
ATGGACGCCG AAGGACGCGT GTTCTACGTC GGCCGCACCA AGGACATGAT CCGACGTAGT
GGCGAGAACA TCGTCGCCGA CGAGGTGGAA CGCGCACTGC AACAACACCC CGCCGTACGC
ACGGCCGCCG TACTCGGCGT GCCCGACGAA CTTAGGGGTG AGGAGGTGAA AGCGCTCGTC
GTGCTCGCCG AGGGGCAGCA GGTCACACCG GACGAGCTGG CCGAATTCTG CGGCACGAAA
CTCGCCTACT TCAAAGTGCC GCGTTACTGG GCGTTCGTGG AGTCACTGCC GATGACGGCC
TCGGAACGGA TCGCCAAGGG CGAGCTTCGC AAGGCGGGCG CGGCCACCCC CGAGGACTCC
TACGACCGGG TGGAGCAGCA GTGGCGTTAG
|
|---|
| Protein sequence | MSADDLVGLL RHAAVTWPDK TAWVFDATDD RLTFADLADR VEALAGSLHA LGVRRGDHVA
VMLENQPEFP LTWLALARLG AVLVPVNTNY RELDGRHVLA HSGARFVVAG ERFTELLTTI
APKTSVERVL TFSELPDGDE PPAYEPAPEL PTNIQYTSGT TGAPKGCVLP HRYWTTLAGG
LVADFPNINA EDTILTAQPF HYIDPQWNVA LGLASGATLV VLDRFHPSTF WQKVREHGVT
WFYCLGLMPT LLLRMPPSEA DRDHRVRAIS ASAIPKELHA ELEQRWGVPW FEAFGMTETG
GDIRMDPADH DEYVGTGCLG RPAPGREVMI ADEHGRPVPR GQEGELLIRG VGLMHGYHDD
PEATARAFRG GWFRTGDVAR MDAEGRVFYV GRTKDMIRRS GENIVADEVE RALQQHPAVR
TAAVLGVPDE LRGEEVKALV VLAEGQQVTP DELAEFCGTK LAYFKVPRYW AFVESLPMTA
SERIAKGELR KAGAATPEDS YDRVEQQWR
|
|---|
| |