| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_33130 |
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| Symbol | |
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| ID | 8388637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 3597667 |
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| End bp | 3599490 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644977335 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_003135104 |
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| Protein GI | 257057272 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0486618 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.887985 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGGAATC CTCGGACGCT CGACGTGCTA CGGCGTGTCT TCGGTTATGA CACGTTCCGT
GACAACCAGC AGCAGATCGT CGACCACGTG ACCGCCGGCG GCGATGCGCT CGTACTCATG
CCGACGGGCG GGGGCAAGTC ACTGTGTTAT CAGATCCCCG CACTGGTCCG CGACGGTGTC
GGGGTGGTCG TCTCACCACT GATCGCGCTG ATGCAGGACC AGGTGGAGGC GCTGCGCGCG
GTGGGGGTAC GGGCGGGCTA CCTCAACTCC ACGCAGGACC CCGACGAACG ACGCATGGTC
GAGGCCGAAT TCCTCGCGGG CGAACTCGAC CTGCTCTACC TCGCACCGGA ACGGCTGCGC
TCCGAGGCCA CGATGCGGTT GATCGAACGC GGTCCGGTGT CGGTGTTCGC CATCGACGAG
GCGCACTGCG TAGCGCAGTG GGGGCATGAC TTCCGTCCCG ATTACCTGGA ACTGTCGAAG
TTGTCCGAGC GCAGACCGGA CGTGCCGCGC GTGGCGTTGA CCGCGACGGC GACGCCGGCC
ACCCGCGCCG AGATCACCAC CCGGCTGGGG TTGGAGAACG CGCGCGTGTT CGTGTCCAGC
TTCGACCGAC CGAACATCCA GTACCGCATC GTGCCCAAAA AGGACCCACG CAGGCAGCTG
CTGGACTTCC TGCGGACCGA ACATCCCCAC GACGCGGGCA TCGTGTACTG CCTTTCGCGC
CGATCGGTGG AGGAGACCGC CGAGTTCCTG ACCCGTAACG GCATCGAGGC GCTGCCCTAC
CACGCCGGGC TCGACTCGGC GACGCGGATC CGGCATCAGG CCCGGTTCCT CCGCGAAGAG
GGGTTGGTGG TGGTGGCCAC CATCGCGTTC GGCATGGGTA TCGACAAACC GGACGTGCGG
TTCGTGGCGC ACCTCGACCT CCCGAAGTCG GTCGAGGGCT ATTACCAGGA GACCGGGCGG
GCGGGCCGGG ACGGTCTGCC GTCCACGGCG TGGTTGGCGT ACGGACTGTC GGACGTCGTC
GCCCAGCGGC GGTTGATCGA CACCTCCGAG GGCGATGCCG CCCATCGTCG ACGGCTGGCC
GCTCATCTGG ACGCCATGCT CGCCCTGTGT GAGACGGTGG AGTGTCGCCG GGTCGGGCTG
CTGGCCTATT TCGGGCAGGA TTCGCGGCCG TGCGGCAATT GCGACACGTG TCTGTCACCG
CCCGAGTCGT GGGACGGCAC CGTGGCCGCT CAGAAGCTGT TGTCCACCGT GGTGCGGCTG
CGTCGGGAGC GCGGGCAGAA GTTCGGGGCG GGACAGGTCG TCGACATCCT GCGCGGCAAG
CACACGCCCA AGGTCACGCA GCACCGGCAC GACGAGTTGT CGGTGTTCGG TGTCGGCTCC
GATCTCAGCG AGGTCGAGTG GCGCGGAGTC GTCCGGCAGT TGCTCGCACA GGGACTGCTC
GCCGTCGAAG GCGATTACGG CACGCTCGTC ACCACGGAAG CTTCCGACGA GGTGCTGTAC
CGGGGGCGCA CCGTGCGGAT GCGGCGTGAT CCGAACCGCC TCGCCGTGCG CTCGTCGCGG
GCCACGGCCA AGTCCGCGGC AGCCCCGTCC GTGGAGTTGG ACGGCGAGGC GGCCGCGTTG
TTCGAGCAGT TACGTGCGTG GCGGGCCACG ACCGCGAGGA GTCAGGGCGT TCCCGCCTAC
GTCGTCTTCC ACGACGCGAC GCTGCGACAG ATCGCATCGC TACGCCCGGC GACCCTCGGT
GAGCTGAGCA CTGTGAGCGG GGTCGGGGAG AACAAACTGG CCAAGTACGG AGACCGGATA
CTCGAAATCA TCGCCGGAAC GTGA
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| Protein sequence | MGNPRTLDVL RRVFGYDTFR DNQQQIVDHV TAGGDALVLM PTGGGKSLCY QIPALVRDGV
GVVVSPLIAL MQDQVEALRA VGVRAGYLNS TQDPDERRMV EAEFLAGELD LLYLAPERLR
SEATMRLIER GPVSVFAIDE AHCVAQWGHD FRPDYLELSK LSERRPDVPR VALTATATPA
TRAEITTRLG LENARVFVSS FDRPNIQYRI VPKKDPRRQL LDFLRTEHPH DAGIVYCLSR
RSVEETAEFL TRNGIEALPY HAGLDSATRI RHQARFLREE GLVVVATIAF GMGIDKPDVR
FVAHLDLPKS VEGYYQETGR AGRDGLPSTA WLAYGLSDVV AQRRLIDTSE GDAAHRRRLA
AHLDAMLALC ETVECRRVGL LAYFGQDSRP CGNCDTCLSP PESWDGTVAA QKLLSTVVRL
RRERGQKFGA GQVVDILRGK HTPKVTQHRH DELSVFGVGS DLSEVEWRGV VRQLLAQGLL
AVEGDYGTLV TTEASDEVLY RGRTVRMRRD PNRLAVRSSR ATAKSAAAPS VELDGEAAAL
FEQLRAWRAT TARSQGVPAY VVFHDATLRQ IASLRPATLG ELSTVSGVGE NKLAKYGDRI
LEIIAGT
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