| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_33000 |
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| Symbol | |
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| ID | 8388624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 3580245 |
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| End bp | 3581888 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644977324 |
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| Product | PAS domain S-box |
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| Protein accession | YP_003135093 |
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| Protein GI | 257057261 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4585] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.569309 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGACC CCTCGGGAAC CGAGCGGACG GCAGCGTCGA CGTTCCCGCC CGAAAGATGG
GCCGAACTCG CCGAAGACGC GCCGGACGGT CTCGCCGTGC TGGACCCCGC GGGTCGCTTC
CTGCACATCA ACCGCGTCGG AAGGGAGTTG TGCGGCGGCA CCGCGGACAG CCTCATCGGA
GCCCCCGCTC CGTTCCTGCC GGTCAAAAGC TGCGACACCG AACCACCCGG GCTGCTCGAC
GACGACTTCG CCGAACACGT CACCACCTGG TCCCCCACGC CGGGCGTCCA CCGGGAGTTC
GCCTACCGGC TCACCCCGCT GTCATCCGAC CCCTCGTTCA GCGTGGTCGC CTTCCGGGAC
GTCACCGACG AACGTCATCG GCAGCGTCGG GTCGCCGCCA TCGCCCGCAC CGCGGCCAAA
CTCGCCTCGG ACAGGTCCTT GACCGGGATA CTGGACGCCC TGGCCTCCGA GGTGTTGAAG
ACCGACGCGC TGGCGGGCGT GCAGATCCTG ACCAGGGAGG AATCCGGCGG CGGCCTGCGC
ATCATCGGGT CCGCCGGTTT CCGACACCGA CCGGACTTCT TCGACAGGTT GGTCGAGGTC
TGTGAACGCG GCGGCACGCT GTTGATGCTC GAGGCCATCG AAACCCGCAA ACCGGTGATC
GTTCCGAACC GTTGGGAACT GATCCGGAAC GACCCGACGT GGGAACCGCT CCACGACTAC
CTGAGTGAGC TGAAGTGGGG CTCCTTCGCC AGCATCCCGT TGATCATCCG CGGCCATGCG
GCGGGCGTGC TGAACGCGTT CTTCGCCGTC GGGCAGAGCG TGGGCCAGCG GACGATGGAG
TTCCTGACCG CGATGGCCGA CCAGGCCGCC ATCGCGGTCG ATTACGCGAA GTTCATGCAG
CACGCACGTG ACGTCGCCCG ACGCGACGAA CGGCAACGGC TCGCCCGCGA CCTGCACGAC
TCGATCGTCC AACAGGTGTT CTCCATCAGC ATGCAGGCCA AGTCCATGCA AGTGCTGGCG
CAACGAGACG AATCCGTGTC CGCCCAGTCG GTGCGGCGCA TCGCGGACGA GATCAGCCTG
CTTTCACAAA CGGTCCTCAC CGACCTACGG GCGATGGTCC ACGAACTACG ACCGGCGCCG
TCGGCGGAGT TGGGCGGACT CGAAGAAGCC GTCCGCGCCC TCGTCGACAG CACCACGAAC
CGCACCGGTC TGCGCTTCAG CCTGATGATC GGGCGCGGCA TCGAACACAT CAAAGGGGAA
CTGGCGGAGG ACGCCTACCG GACCGTCTCC GAGGCCATTC ACAACGTCGT CAAACACGCC
GCCGCGAGCA GAGTCGTGGT CCGACTGGCG ATCCGGGGGG ATCGGCTGGA AGCCACCGTC
AGCGACGACG GCCGCGGCAT CGACGCGGCG AAAGGGAACA CGGACCGATC CGGCCCGGCT
CATGGGTACG GATTGGCGAC GATGCGGGAA AGGGCTCAGC GATGGGGTGG AACTCTGACA
GTCCGGCCAC GACGGCCCAC CGGCACCATC GTGCGGCTCA GTATGCCGAT GACCGGGGAG
AGTCCGTTGA CCGCGGGACG TCTGCTGACG ATCGGCATCA CCGACCGGAC TCCGGTGCCC
GAGCGACCGG AGCGACCGCG GTGA
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| Protein sequence | MPDPSGTERT AASTFPPERW AELAEDAPDG LAVLDPAGRF LHINRVGREL CGGTADSLIG
APAPFLPVKS CDTEPPGLLD DDFAEHVTTW SPTPGVHREF AYRLTPLSSD PSFSVVAFRD
VTDERHRQRR VAAIARTAAK LASDRSLTGI LDALASEVLK TDALAGVQIL TREESGGGLR
IIGSAGFRHR PDFFDRLVEV CERGGTLLML EAIETRKPVI VPNRWELIRN DPTWEPLHDY
LSELKWGSFA SIPLIIRGHA AGVLNAFFAV GQSVGQRTME FLTAMADQAA IAVDYAKFMQ
HARDVARRDE RQRLARDLHD SIVQQVFSIS MQAKSMQVLA QRDESVSAQS VRRIADEISL
LSQTVLTDLR AMVHELRPAP SAELGGLEEA VRALVDSTTN RTGLRFSLMI GRGIEHIKGE
LAEDAYRTVS EAIHNVVKHA AASRVVVRLA IRGDRLEATV SDDGRGIDAA KGNTDRSGPA
HGYGLATMRE RAQRWGGTLT VRPRRPTGTI VRLSMPMTGE SPLTAGRLLT IGITDRTPVP
ERPERPR
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