Gene Svir_32580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_32580 
Symbol 
ID8388582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3538643 
End bp3540556 
Gene Length1914 bp 
Protein Length637 aa 
Translation table11 
GC content71% 
IMG OID644977285 
Productprotein kinase family protein 
Protein accessionYP_003135056 
Protein GI257057224 
COG category[L] Replication, recombination and repair
[T] Signal transduction mechanisms
[R] General function prediction only
[K] Transcription 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.356943 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGATTG ATCCCACGCC GGCCGCCAGA CCGCTGGCGG CCGGCGATCC GCGGCAGCTC 
GGCTCTTACC GAGTACTCGG TTCGCTCGGC GAAGGCGGCA TGGGTCGGGT GCTGTTGGCG
ATCGGTCCCG ACGGGCGTTT CGCCGCTGTG AAGCTCGTGC ACGGGTTCCT GGCGCACGAT
CCGGTGTTCC GCGAACGTTT CCGTCGGGAG ATCGCGGCCT GCCGTCTCGT GTCCGGTGCC
TACACCGCGC CGGTCCTGGA CGCCGACGCC GACGCGCCGA CACCGTGGCT GGCCACCCTG
TACGTACCGG GACCGTCCCT GCGGAACGTC GTGACCACCA CGGGGCCGCT TCCGGCGTCG
TCGCTACGGC AGCTCGCCGT CGGTCTGGCC ACGGCGTTGG CCGACATCCA CCGTGCCGGG
CTCATCCACC GGGACCTCAA ACCCGGCAAC GTACTCCTCG CCCACGACGG GCCCCGCGTC
ATCGACTTCG GCATCGCACG CGCCGTCGAG GACCACGATG AACTGACCAA CACCGGGTCG
ATCATCGGTT CGCCCGAGTT CATGTCACCC GAACAGGCAC TGGGGCACGC CTTGACCCCG
GCCACCGACG TGTTCTCCCT GGGCTCGGTC CTCGTGTTCG CCGCGACGGG ACGCAGCCCC
TTCGCCGGTT CGTCCGCCGC ACAGGCGCTG TACAACATCG CGCACACCGC CCCCGATCTG
ACCGGTGTGC CCGAACCCCT GCGCGGAATC GTCGCCGCCT GCCTCGACAA GGACGCCCAG
CGGCGGCCGA GTCCGGTGGA ACTGCTCGAC CGCATCACCG CTGTCGGCGC CGCCCCACCC
GGCACCGCAC CCTGGCCCCA ACCGGTCCAC GACCTCATCC ACGCGCAGGA AACACAAGCC
AGACGAGCAC TGGACCCGCC ACCGAGCCCG CGGACGGTGC GACGCTGGCC CATCCTGGCC
ATGACCGCCG CCACGGTGGC GGCGGTCGGT GTCGCCGCCG CCTTGCTGTT GCGCGACGAT
TCCGGCACCC CCACCGGACA CGCGGCCCCG GAAGGCCCGC CCTCGGCGCT TCCCGGTCAG
CCCACCGCCG GACGGCACGA GGACGACCCG TTGAGCCTGG ACCGGCTCAG GGCCGTCGAT
CCGTGTCGGG TGCTGTCGGG ACAGCTCACC CCTCAACCCG CCGTACACCT GTCGCAATGC
ACTTACGAAC ACGAGGACGG ACGCTGGTTC GACCTCGTCC TCGGCGACGC CGTGCCGGTG
GACCCGACAC CCGGCGAGGA GATCGACGAC CGGGACGTCG GAGGGCTCCC GCTCGTCGTC
GACCACGGCG GGGACGGCCG ATGCGAGGCC GTGGCCGTGT TACCCCAACA CGCCGACCTG
GGCGTCAGCG TCACCGTCGG CCCCGGCATC GGTGACGTCA GGGACGAACC CTGCTCCAGC
GCCCACGCCG TGTTGTCCGA CGCACTGGAG GCGCTGCGCG ACAACGCCCC ACAACGCGAC
GCGGTGCCCG GTTCGCTCGC GACCGTCGAT CCGTGCTCAC TGCTCGACGA CACCGAGGTC
TCACGCATCT TCTCCGTGGC ACCGACGACG CGTCCCGATC GGCTGCATCG GTGTGAATGG
GACGTCACCG GCACGCTCGT CATCGAACTG TCACGCGACG TCGACCCGGC TGACGTCCCG
AGCCAGTGGG AGCAGGACAG CGTGGGCGGC CGCACCGTCT ACCGGCAGGA GGACCCACAG
CCGGGCAGTC CGTCCTGTGC CCTCAGCTGG GCGCATCGAC CCTCCGACGA GGTGACCACC
GAAGTCGTGT CACTGCGCTA CCGCGCCACC GCCACCGGAC GACCCGTCAA CGCGGTGTGC
GCCGACATCC GCTCCGTCGC CGAGGCCGTC ATACCGAGGT TGCCGACACC ATGA
 
Protein sequence
MSIDPTPAAR PLAAGDPRQL GSYRVLGSLG EGGMGRVLLA IGPDGRFAAV KLVHGFLAHD 
PVFRERFRRE IAACRLVSGA YTAPVLDADA DAPTPWLATL YVPGPSLRNV VTTTGPLPAS
SLRQLAVGLA TALADIHRAG LIHRDLKPGN VLLAHDGPRV IDFGIARAVE DHDELTNTGS
IIGSPEFMSP EQALGHALTP ATDVFSLGSV LVFAATGRSP FAGSSAAQAL YNIAHTAPDL
TGVPEPLRGI VAACLDKDAQ RRPSPVELLD RITAVGAAPP GTAPWPQPVH DLIHAQETQA
RRALDPPPSP RTVRRWPILA MTAATVAAVG VAAALLLRDD SGTPTGHAAP EGPPSALPGQ
PTAGRHEDDP LSLDRLRAVD PCRVLSGQLT PQPAVHLSQC TYEHEDGRWF DLVLGDAVPV
DPTPGEEIDD RDVGGLPLVV DHGGDGRCEA VAVLPQHADL GVSVTVGPGI GDVRDEPCSS
AHAVLSDALE ALRDNAPQRD AVPGSLATVD PCSLLDDTEV SRIFSVAPTT RPDRLHRCEW
DVTGTLVIEL SRDVDPADVP SQWEQDSVGG RTVYRQEDPQ PGSPSCALSW AHRPSDEVTT
EVVSLRYRAT ATGRPVNAVC ADIRSVAEAV IPRLPTP