| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_32420 |
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| Symbol | |
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| ID | 8388566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3515285 |
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| End bp | 3516967 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644977269 |
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| Product | long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_003135040 |
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| Protein GI | 257057208 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.300153 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.567165 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCGGT TCGTGGAGAC GATGGTCGCC ACCGCGAATG CGGGTGGACG GCAACGTGGA
ATGGTCACCG GAGAGCCCCG GGAGCCTGTT CGTAGGACAT GGTTCGAGGT GCACCAACGT
GCCCGTCGTA TCGCGGGTGG ACTCGTCGCG GCGGGCCTCG AACCGGGTGG GGCCGTCGCG
GTGCTCGCGG GTGCTCCCGA ACTGATCGCC CCCACCGTCC AGGGGGTGTG GCTCGCGGGC
GGCAGTGTCA CCATGCTGCA TCAGCCCACG GCGCGCACCG ACCTGGCGAA GTGGGCCGAG
GACACACTGC GCGTGCTGCG CATGATCGGT TCGTCCCTCG TGGTGCTCGG TGAGCCCTTC
GACGGCCTGG CTTCCGTCCT CGACGAACAC GGCATCGCCT ACCGCGCCAT CAACGACCTG
CTCGAGGCCG AGCCGCTGGC CGAGCCCGTC GCCGTCGAGG AGGACGCGCT CGCGCTGTTG
CAGCTGACGA GTGGGGCCAC GGCCGATCCC AAGGCCGTCA AGATCACCCA CGCGAACCTG
TACTCGAACA TCAGCGCGAT GATCGAGCGG GCCGAGTTCG ACGTCGAGTC CGACGTCATG
GTGTCGTGGT TGCCGTTGTT CCACGACATG GGCATGGTCG GGTTCCTCAC CGTGCCCATG
GTGTTCGGCG TGGAACTGAT CAAGATCACG CCTGTCGACT TCCTCAGCGG CCCGTTGGTG
TGGCCGGAGC TGATCAGCAA GTATCGCGGC ACCACCACGG CCGCCCCGAA CTTCGCGTAC
GCCATCGTCG GTCGCAGGCT GGCCAAGGTC GAGGACGACA AGGCCTACGA CCTGTCCACG
CTCCGGATCG CGCTCAACGG CGCCGAACCC ATCGACCCGA CGGCCGTGCG CACCTTCACT
GAGGCGGGGG CGCGTTTCGG GATGCCCGCC GAATGCGTGT TCCCTGCGTA CGGCCTGGCC
GAGGCCACCC TCGCGGTCTC GTTCGCGCCC TTGTTCACGG GGCTGACCGT GGACACGGTG
GCGGCCGATC CGCTGGAGGC CGACAACCGT GCCGTCCCCG TGGCCGAGGA CGATCCGCGC
TACGGCACCG ATCAGGTGCG GCAGTTCGCG ATGCTCGGAT ATCCGTTGTC CGGCTTGGAA
GTCAGGATCG TCGGCGAGGA CGGCACCGTG CGCGGCGATC GTGAGGTGGG CGAGATCCAC
CTGCGCGGGG ACGCGGTGTC GCCCGGCTAC CGGACGGTCG ACGGGCCGGT CGACACGCAG
GACGCCGAGG GCTGGTTCGC CACCGGCGAC ATCGGATACC TCGTGGACGG TCAGGTCGTC
ATCTGCGGCC GGAAGAAGGA CGTCATCATC CTCGGTGGCC GCAACGTGTA TCCGACCGAC
ATCGAGCGGG CCGCGACCTC GGTGCCGGGG GTCCGGGCGG GCAACGCCGT GGCGGTCCGT
ATCGACGCCG GTACCCGCCG GGAACGTTTC GCCGTCGTGC TGGAGTCCAC TGTGGCTGGT
GATGCCGAGG CGGAGCGCGC GTTGGCGAAC GAAGTCGCCG CCCGGGTACG CGCCGCCGTG
GACGCCCGTC CGTACTCGGT GGTGGTGCTG CCCAAGGGGA GCCTGCCGAA AACGCCGTCC
GGAAAGGTCA AGCGCGCGGC GACCGCCACG CAGTACCGTG ATCTGATCGA CTCGCGCGCC
TGA
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| Protein sequence | MSRFVETMVA TANAGGRQRG MVTGEPREPV RRTWFEVHQR ARRIAGGLVA AGLEPGGAVA
VLAGAPELIA PTVQGVWLAG GSVTMLHQPT ARTDLAKWAE DTLRVLRMIG SSLVVLGEPF
DGLASVLDEH GIAYRAINDL LEAEPLAEPV AVEEDALALL QLTSGATADP KAVKITHANL
YSNISAMIER AEFDVESDVM VSWLPLFHDM GMVGFLTVPM VFGVELIKIT PVDFLSGPLV
WPELISKYRG TTTAAPNFAY AIVGRRLAKV EDDKAYDLST LRIALNGAEP IDPTAVRTFT
EAGARFGMPA ECVFPAYGLA EATLAVSFAP LFTGLTVDTV AADPLEADNR AVPVAEDDPR
YGTDQVRQFA MLGYPLSGLE VRIVGEDGTV RGDREVGEIH LRGDAVSPGY RTVDGPVDTQ
DAEGWFATGD IGYLVDGQVV ICGRKKDVII LGGRNVYPTD IERAATSVPG VRAGNAVAVR
IDAGTRRERF AVVLESTVAG DAEAERALAN EVAARVRAAV DARPYSVVVL PKGSLPKTPS
GKVKRAATAT QYRDLIDSRA
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