| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_32160 |
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| Symbol | |
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| ID | 8388540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3485758 |
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| End bp | 3487866 |
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| Gene Length | 2109 bp |
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| Protein Length | 702 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644977243 |
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| Product | tetratricopeptide repeat protein |
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| Protein accession | YP_003135016 |
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| Protein GI | 257057184 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.277202 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTTGGTG CGCTGGTCTT CGCCGTGGTG TCGGGGGCCG GAGCCGTGGT GAAGGCACTG
GGCGTGGACA ACGTGTGGTG GGTGGCGGGC GTCACCGCGG TTGTGACGGC AGTCGGCAGC
GTGATGGCAC CGCGCTTCAA ATCCCGTTGG GATAAGTGGG CCGAGGAGCG AGAGAATCGC
CGACAGGCGG TGGACCGGGC CGCGCTTCGG GGTGGGCGGC TTCAAGTACG CGACATCACC
AATCCCAAGG TGTTGGGGGT GCATCCGGCC CGGCTTCCGG AAGGGGTGGA CGCCGACGAC
AAGGCCGAGT TCGATCTGCC GGTCTATGTG CGGCGGGATC GCCACGACGA TGTGGCTGCG
CACCTGAAGC CGGGTGGGTT CGTGCTCATC GCCGGAGTGT CCGCGGCCGG CAAGACCCGA
CTGGCGTTCG AGGTGGTCAG TGCCCGACTG CCCGAGCACC GACTGCTGGT GCCGGAGGGT
TGGGCCGACT TTCAGGCTCT CGCCGAGGAA GCCGCGGCCA CCAGGAAATG TGTGGTGTGG
CTGGATGATC TGGAACGGTT CCTCGGTGAC GGGCGGCTGA GCACCACCGT GGTGGACAAG
ATCCTCGCCG GGGACGGCCA TCACCGGGTG ATGGTGGCCA CGATCCGCAG CGAAGAACTC
TCCCGCCTCA AAGACGAGGC GGATCGTTTG GACGAGCGTC GCCGGGTCCT CGACCAAGCC
GCCACCATCC AGCTGGGCGA GACCTTCACC GCCACAGAGT TGGGACGGGC CGAAAAGCTG
CGGCAAGACC CCCGTATCGA CGATGCCCTG CGCAACGCAT CCGGGCATGT CACCGAATAC
CTTGTTGCAG GACCGGAACT GGTCCAACGC CTCGACAATG CCTCCGCCAC CCAGCCTCGT
GGAGTCGCCC TAGTAGCTGC CGCCATCGAC TGCCGCCGCG CCGGCTGGAT CGGCCCCCTT
TCCACACAAC TTGTGGAGAA GCTGCACACC GACCACCTCA ACCCCCGCTA CAGCCCCGAA
ACACTGGGAC AAGCCTGGGA ATGGGCCACC ACACCCATCC CCCGCACCGC CACCGCCCTG
CTAACCAAAA ACGGCAAAGA CGTCACGGTG GCCGACTACA TCGTCGACCA CACCCAACGC
ACCAGCCGCC CCGACGACCA CGTCCCCGAC ACCACCATCC ACACCGCTCT AGAACATGCC
GACGCCCACA GCGCCGACAA CATCGGCCAC ACCATGCGGG CACAGGGCCG CTATCAGCTC
GCCCACACCG CCCTCACCCA CGCCCTCCAC CTCCACACCA CCACACACGG CCCCCACCAC
CCCAACACGC TGACCACCCG CCACAACCTA GCCGGCGTGC TGCAGGATCT TGGTCAGTTG
GATCAGGCCC GTGCGGAGTT CGAAGCCGTC CTCGCCACCC GTACCGAACA GTTTGGGGCT
GATCACCCCA GCACCCTGGT CGCCCGCCAC AACCTGGCTC TTGTGTTGCG GGATCTTGGT
CAGCTGGATC AGGCTCGTGC GGAGTTCGAG GCTGTCCTTG CCGTCCGTAC CGAACAGTTT
GGGGCTGATC ACCCCAGCAC CCTGGTCACT CGCGCCAATC TGGCCAGCGT GTTGCGGGAT
CTTGGTCAGC TGGATCAGGC TCGTGCGGAG TTCGAGGCTG TCCTTGCCAC CCGTACTGAG
CTACTCGGAG CTGACCACCC CAGCACCTTG GCCACCCGCC ACAATCTGGC CGGCGTGCTG
TGGGATCTTG GTCAGCTGGA GCAGGCCCGC ACGGAATTCG AAGCCGTCCT CGACATCGAA
ACTGAACTTC AAGGGGCTGA TCACCCCAGC ACCCTGAGTC GAGCTCAGCG ACAGATTCGA
GCCCGTGGGC TGCGGGGCAC GTTCGGGGTA CCCGAGCATG ATCATTCATC GAAGATCATG
ACAAACGATG ACGGTGACAC CCCGTTCGTC ACACAACACC ACACGTTTCC CGGACTCGGG
CTCCACGTAT TCATTCAGCA CGAAACCGAG TTGGTCGCTC GACTCGTCTC ACGGGGTCCT
GACATCGCAG ACGGCCCCCA AGGCGACGGC GGTCCCGTCG CTCGGGGACG CTTCGGGGCC
AAGGGGTAG
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| Protein sequence | MVGALVFAVV SGAGAVVKAL GVDNVWWVAG VTAVVTAVGS VMAPRFKSRW DKWAEERENR
RQAVDRAALR GGRLQVRDIT NPKVLGVHPA RLPEGVDADD KAEFDLPVYV RRDRHDDVAA
HLKPGGFVLI AGVSAAGKTR LAFEVVSARL PEHRLLVPEG WADFQALAEE AAATRKCVVW
LDDLERFLGD GRLSTTVVDK ILAGDGHHRV MVATIRSEEL SRLKDEADRL DERRRVLDQA
ATIQLGETFT ATELGRAEKL RQDPRIDDAL RNASGHVTEY LVAGPELVQR LDNASATQPR
GVALVAAAID CRRAGWIGPL STQLVEKLHT DHLNPRYSPE TLGQAWEWAT TPIPRTATAL
LTKNGKDVTV ADYIVDHTQR TSRPDDHVPD TTIHTALEHA DAHSADNIGH TMRAQGRYQL
AHTALTHALH LHTTTHGPHH PNTLTTRHNL AGVLQDLGQL DQARAEFEAV LATRTEQFGA
DHPSTLVARH NLALVLRDLG QLDQARAEFE AVLAVRTEQF GADHPSTLVT RANLASVLRD
LGQLDQARAE FEAVLATRTE LLGADHPSTL ATRHNLAGVL WDLGQLEQAR TEFEAVLDIE
TELQGADHPS TLSRAQRQIR ARGLRGTFGV PEHDHSSKIM TNDDGDTPFV TQHHTFPGLG
LHVFIQHETE LVARLVSRGP DIADGPQGDG GPVARGRFGA KG
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